Gene Ava_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3473 
Symbol 
ID3679785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4306670 
End bp4307137 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content37% 
IMG OID637718825 
ProductTPR repeat-containing protein 
Protein accessionYP_323975 
Protein GI75909679 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0242658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAC ACCTTCAATT AACTGACATT TTGGCAACTG TTGCCGTCCT TGTTAGTATC 
ACATTCCTAA TTTATTTCGC CGGGAAAACC TTAGTTACTT CCAACTTCTT TCAGAAAGGA
GTTAATCTCT ATCAACAAAA AGATTATCCA GGTGCAGAAG CAGCATTCCG CAAAGTTATA
GCTATCAACT CTACTAATGA TGTAGTCCGC TTGTTTTTGG GAGACGTTTT AAGGGAACAA
GGTAAAGTCG CAGAAGCAAC AGAATTATTT CAAGAAGTTA TTAACCGTAG CCCAAAAAAT
CCTCAAGGTT ACTTACGTTT AGCAACTATT CTTATGCAGC AAGAAAAACA AGCAGAAGCT
AAAACCAACT TACAAAAAGC TCAAGAATTA TTGCAAAAAC AACGTCAACC AGAAACAGCT
AAACGGGTTG CTAAATTATT AGAGCAAATG AATACTAAGA CAATCTGA
 
Protein sequence
MLEHLQLTDI LATVAVLVSI TFLIYFAGKT LVTSNFFQKG VNLYQQKDYP GAEAAFRKVI 
AINSTNDVVR LFLGDVLREQ GKVAEATELF QEVINRSPKN PQGYLRLATI LMQQEKQAEA
KTNLQKAQEL LQKQRQPETA KRVAKLLEQM NTKTI