Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3473 |
Symbol | |
ID | 3679785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4306670 |
End bp | 4307137 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637718825 |
Product | TPR repeat-containing protein |
Protein accession | YP_323975 |
Protein GI | 75909679 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0242658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAAC ACCTTCAATT AACTGACATT TTGGCAACTG TTGCCGTCCT TGTTAGTATC ACATTCCTAA TTTATTTCGC CGGGAAAACC TTAGTTACTT CCAACTTCTT TCAGAAAGGA GTTAATCTCT ATCAACAAAA AGATTATCCA GGTGCAGAAG CAGCATTCCG CAAAGTTATA GCTATCAACT CTACTAATGA TGTAGTCCGC TTGTTTTTGG GAGACGTTTT AAGGGAACAA GGTAAAGTCG CAGAAGCAAC AGAATTATTT CAAGAAGTTA TTAACCGTAG CCCAAAAAAT CCTCAAGGTT ACTTACGTTT AGCAACTATT CTTATGCAGC AAGAAAAACA AGCAGAAGCT AAAACCAACT TACAAAAAGC TCAAGAATTA TTGCAAAAAC AACGTCAACC AGAAACAGCT AAACGGGTTG CTAAATTATT AGAGCAAATG AATACTAAGA CAATCTGA
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Protein sequence | MLEHLQLTDI LATVAVLVSI TFLIYFAGKT LVTSNFFQKG VNLYQQKDYP GAEAAFRKVI AINSTNDVVR LFLGDVLREQ GKVAEATELF QEVINRSPKN PQGYLRLATI LMQQEKQAEA KTNLQKAQEL LQKQRQPETA KRVAKLLEQM NTKTI
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