Gene Ava_3449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3449 
Symbol 
ID3679839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4278621 
End bp4279436 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content44% 
IMG OID637718801 
Productextracellular solute-binding protein 
Protein accessionYP_323951 
Protein GI75909655 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACG GATGTAACAG ATGGCAAATA ATTAGTCGGT TACATCTGAT ATTATCCGCC 
ATCATTATTT GCTGGATGAT TTCGGCTACA GGACTCGCTG CATCTGCCGC CGAACTGCCA
GAAATTCAGC GCCGAGGCTA CATAACTGTA GCCGTGAAGG ATAATTTGCC TTTGTTGGGT
TTTAAAGACG CTCAGGGCAA TTTACAAGGC TTAGAAATTG ATTTAGCAAA GCGTTTAGCG
GCTGATTTGT TAGGTAAAGC CGACGCTGTA AAATTGCAAC CCGTAAATAA TCGCGATCGC
CTACCTGTAG TATTTAATCA TCAAGTTGAT TTAGCGATCG CCAGAGTCAC CGCCACAGAA
TCACGCTCAC GCTTGGTAAG TTTCAGTGTT CCTTACTACA TGGATGGCAC TTATTTAATT
ACCAAAGATG TGTCTGTACA GCAAATAAAT GATTTAGCCA CGCGCAAAAT TGCTGTCCTG
AATAATTCCA GCACCATCGC CGAAGTCCGT TACTACATCC CCAGCGCCGA GTTAGTGGGA
GTGAATTCTT ACCAAGAAGC GCAAGCAGCA ATAGAAAATA ATAGCGTCGC CGCTTTCGCC
GCCGATGGTA GCCTCTTGAG TGGTTGGGTG CGAGACAATC CTCAATATCG CCTATTACCC
ACAAAACTAT CCACAGCACC CTTATCTGTA GTCATGCCCA AAGGATTGCA GTACGATGAA
TTGAGAAGAG AAGTTAACGA AGCGATCGCC AGTTACATCG CTCAAGGTTG GTTAAAAGAA
CGGATTAGTC ATTGGTCAAT AGTCAATAGT CAATAG
 
Protein sequence
MNNGCNRWQI ISRLHLILSA IIICWMISAT GLAASAAELP EIQRRGYITV AVKDNLPLLG 
FKDAQGNLQG LEIDLAKRLA ADLLGKADAV KLQPVNNRDR LPVVFNHQVD LAIARVTATE
SRSRLVSFSV PYYMDGTYLI TKDVSVQQIN DLATRKIAVL NNSSTIAEVR YYIPSAELVG
VNSYQEAQAA IENNSVAAFA ADGSLLSGWV RDNPQYRLLP TKLSTAPLSV VMPKGLQYDE
LRREVNEAIA SYIAQGWLKE RISHWSIVNS Q