Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3449 |
Symbol | |
ID | 3679839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4278621 |
End bp | 4279436 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637718801 |
Product | extracellular solute-binding protein |
Protein accession | YP_323951 |
Protein GI | 75909655 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAACG GATGTAACAG ATGGCAAATA ATTAGTCGGT TACATCTGAT ATTATCCGCC ATCATTATTT GCTGGATGAT TTCGGCTACA GGACTCGCTG CATCTGCCGC CGAACTGCCA GAAATTCAGC GCCGAGGCTA CATAACTGTA GCCGTGAAGG ATAATTTGCC TTTGTTGGGT TTTAAAGACG CTCAGGGCAA TTTACAAGGC TTAGAAATTG ATTTAGCAAA GCGTTTAGCG GCTGATTTGT TAGGTAAAGC CGACGCTGTA AAATTGCAAC CCGTAAATAA TCGCGATCGC CTACCTGTAG TATTTAATCA TCAAGTTGAT TTAGCGATCG CCAGAGTCAC CGCCACAGAA TCACGCTCAC GCTTGGTAAG TTTCAGTGTT CCTTACTACA TGGATGGCAC TTATTTAATT ACCAAAGATG TGTCTGTACA GCAAATAAAT GATTTAGCCA CGCGCAAAAT TGCTGTCCTG AATAATTCCA GCACCATCGC CGAAGTCCGT TACTACATCC CCAGCGCCGA GTTAGTGGGA GTGAATTCTT ACCAAGAAGC GCAAGCAGCA ATAGAAAATA ATAGCGTCGC CGCTTTCGCC GCCGATGGTA GCCTCTTGAG TGGTTGGGTG CGAGACAATC CTCAATATCG CCTATTACCC ACAAAACTAT CCACAGCACC CTTATCTGTA GTCATGCCCA AAGGATTGCA GTACGATGAA TTGAGAAGAG AAGTTAACGA AGCGATCGCC AGTTACATCG CTCAAGGTTG GTTAAAAGAA CGGATTAGTC ATTGGTCAAT AGTCAATAGT CAATAG
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Protein sequence | MNNGCNRWQI ISRLHLILSA IIICWMISAT GLAASAAELP EIQRRGYITV AVKDNLPLLG FKDAQGNLQG LEIDLAKRLA ADLLGKADAV KLQPVNNRDR LPVVFNHQVD LAIARVTATE SRSRLVSFSV PYYMDGTYLI TKDVSVQQIN DLATRKIAVL NNSSTIAEVR YYIPSAELVG VNSYQEAQAA IENNSVAAFA ADGSLLSGWV RDNPQYRLLP TKLSTAPLSV VMPKGLQYDE LRREVNEAIA SYIAQGWLKE RISHWSIVNS Q
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