Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3300 |
Symbol | |
ID | 3680292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4119130 |
End bp | 4119630 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637718651 |
Product | RNA-binding region RNP-1 |
Protein accession | YP_323803 |
Protein GI | 75909507 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.181276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTGC GCCTATACAT AGGCAATTTG CCAAAAGAAG AAATAGACCG TCAAGAATTG CAAGCGGTTT TTGCCGCAGA AGGCGATGCT GTGACGACGA AACTCATCAA AGACCGCAAA ACAGGCAAAT GCCGTGGTTT TGGGTTTTTG ACAGTAAACA ACGATGAACA AGCTGACCAA ATTATCGAAA AGTATAATGG TCAGATGTTC AAAGAAACGC CTATCAAGTT AGAAAAAGCT TTACCACGAA CCAAAGGTGA TGAAGGTGAG GAGCAAGCAA CTCCTAAACC AGCAACTACC TCTGGCGGTC ATGCGGCTCC TAATACAAAC AAAGAAGGTA GTCGTCGTGA CAAAGGCGCT AAGAAGTCTC GACGTGGCGG CGGTAATCGG GAAAATACCA CCACAACCAC TACTGATTCC GATGCTATTC GTCCAGATCC CCGTTGGGCT TCTGAATTAG AAAAGCTGAA GCAGATACTA GCAGCTCAAG CCACAAATTA A
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Protein sequence | MSVRLYIGNL PKEEIDRQEL QAVFAAEGDA VTTKLIKDRK TGKCRGFGFL TVNNDEQADQ IIEKYNGQMF KETPIKLEKA LPRTKGDEGE EQATPKPATT SGGHAAPNTN KEGSRRDKGA KKSRRGGGNR ENTTTTTTDS DAIRPDPRWA SELEKLKQIL AAQATN
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