Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3275 |
Symbol | |
ID | 3680306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4081438 |
End bp | 4085862 |
Gene Length | 4425 bp |
Protein Length | 1474 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637718626 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_323778 |
Protein GI | 75909482 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.918383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.348051 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTAA TTAACCTGGA TCTAGTTATC AGCGCAGTTA CTAGCATTGC CAATCCTGTG ATTAAAGAAA AAATCCTGCG TAGTGAGACG GTAATTAAGT TACTCCAGCA ATTTAACCTT GATCCAGAGC ATCCACCTGC GGATTTTAGC GGTGTTTACG CCTACACCTT AGTCGAGTAT GGTGTTGGCA AACCAAAAGC ATTTCTTGAA TTATTTCGAC AAGAAGCAAT TAAACAGGCT TTTCGCAAAG CATTAGGTCA TAATAACCCC TCAATTCTAC TGTCTGAGGT TGATGCTTTT CTTGATTCTT ATACTTTGGG CGATGAAATC AGAAGCTTAG AACTGGACGT GAGAAGAGAG GTAGCTGCAT TTGCGACTGT CTTTATTGAA GTTGCCAAAC GCAGTCGCAC ACCTGCTGAT GTCCTGATGA GTCAGCAGAT TGGTTCTTTA CATAAAAGGA TTGCTAGTAT CCAAGAACAA CTAGAGAGAT TGCCTACACT GGAAGGAATT CGGACAGAAA TAGCACGATT AGCAGCCCAG AATTATCCAG CATTAGCCGG AGCAACAACG GAAAATCAAT GTAGAGCGAT CGCCTTAGCC CAACAAATGC GAGGATGGTT TGAAACCTTG GGCTACCGCC TAGAAAAATA TGAAATCTGG GCAGAAGATT ATTTTGAATG GATTATCAAC GTTCCAGTCC GCCGCAGTTA TGACCGCATT CTTGTACGTG GAGTTGCGGG AGAAGTGAGA CTGAGTGATG TTATGGCCTT GCGTCAATCA GTTAATCAAC AAAAAACAGA TGAAGGCTGG TTGGTAAGTA ACCGTCGGAT TGCCCGTGCA GCACGCGATG AAGTCAAGAA GGAAGAAAAT CGTCATCTAG ATTGTTTTAC ATTTGACGAA CTGATTGATT TAGATGCTGA CTTTACTGGT TATCTTGATT GGTTAGAAGC GGAAATCAAA CGCCGAAAGA TTGATCAAAA GTATGTCCCA CTTGCTTGTA CTAAAGAAGA AATTGATCCA GTAACTAAGC GACGAATTGG TGTCAGCCGT TATGAGGCAG AAGACGGCTG GATTGATGGT TATATCGACT TGTGGCTTGA TGACCCTGCA AAAGAGCATA TTTCCATTCT GGGAGAATTC GGCACAGGTA AAACTTGGTT TGTCTTTCAC TATGCTTGGA CAGCACTCCA ACGTTACAAG GATGCTCAAA AACGTGGTGT TGAACGTCCC CGTTTACCTT TAGTAATTAC CCTGCGTGAC TTTGCCAAGG CTTTAAATGT AGAAAATGTT TTGGCGGGTT TCTTCTTTAC TCAACACAAT ATCCGCTTAA ATAGCGAAGT TTTTGACCAA CTCAACCGGA TGGGTAAATT GCTGCTCATT TTCGATGGTT TTGACGAAAT GGCAGCAAAA ATTGACCGCC AACAGATGAT TAACAATTTC TGGGAACTGG CAAAGGTAGT AGTTCCTGGT TCTAAAGTTA TTCTCACCTG CCGTACTGAA CATTTCCCAG AGTCCAAAGA AGGACGTGCT TTACTCAACG CAGAACTACA AGCCTCTACG AATAAACTAA CTGGGGAAAC ACCACAATTT GAAGTTCTGG AACTGGAGAA ATTCAACGAT GAGCAAATTC GGCAGGTGTT GTTATACCAA GCTGAAGCAG CCACAGTTGA ACAAGTCATG GACAATTCGC AATTACTAGA CTTAGCCCGT CGTCCAGTGA TGACTGATTT AATTTTGGAA GCATTGCCAG ATATTGAGTC CGGTAAACCT ATTGATATGT CACGGGTTTA TCTGTATGCA GTGCGACGCA AGATGGAACG AGATATCAAA GCAGAACGTA CTTTTACTTC CTTAGCAGAT AAGTTGTATT TTTTATGCGA ACTGTCTTGG GAGATGCTGT CTACTGATCA AATGAGTCTG AATTATCGGC TGTTTCCAGA ACGTATTCGT CGCTTATTTG ATTCTGTGGT GCAGGAAGAG AAAGATTTAG ACCACTGGCA TTATGACATG ATGGGACAGA CGATGCTTGT CCGTAATGCT GATGGTGATT ACACTCCGGC ACATAGGTCG CTGTTAGAGT TTTTTGTCGC GTATAAATTT GCGGCTGAGT TAGGAGCGTT AGCTGAAGAT TTTACGGCAT TAGCGCAAGC ACAGTCAGGT TTGGATAGCG GTGCAACCCC TGTTGACTAT ACTTGGTTTG GTTATTTTTC GCGTCAATGG AATGATATTA TTGCACCACT TAAAGCATTT ACAAGGGAGT CTTTTGAGAA GTTAAGAGAA ACTTTTGGCA AAGCTCCACT AACAAAAGCA GTAATAGATT TGCTGGTGCC GATGTTGAGT AATAATGAGT CTCTGATTAG TGTGATTGAA AGGACAAGAG GTCAAAGTGA AGATGCAGTA GGTTACATAG GAGGAAATGC AGCAACTTTA GTTTTGAGGA TTGATCCACT AGGCTTAGAA GGAAAAGATT TAAGCGGCAC TGTCATTAAA GGGGCAGATT TTACCAATGT AAATCTGCAA AATGTCAATT TTTTTGCCGC CAACTTAGTA AATTGTGCTT TTACACGAAC TTTAGGAGCA GTTTTTTCAG TTGCTTTTAA TTCCGATTGC AAACTATTAG CTACAGGTGA TGGTAATGGC ATAGTTCGCT TGTTAGATGC TGCGACCTGT AAAGAGATTT TAATCTGCAA AGGTCATGGC AGTATTATCC CTTGTGTTGC GTTTAGTCCT TCAGCACAAA TACTTGCAAG CGGTAGTTAC GATCAAACAA TAAAACTATG GTCTATCCAG ACAGGAGAAT GTCTTAAGAT TTTGCAAGGT CATGTTTCTG GAATACGTTC AATTGCTTTC AGTCCTTCCG GTGCAATACT TGCTAGTAGT GGTAATGACA ATATAATTAG GCTTTGGAAT ATTGATACAG GCGAATCATT AAAAACTTTA CATGGACATC GTGATCATGT ATATTCAGTA GCTTTTGACC CTTCTGGGAT GATTTTGGTC AGTGGTAGCG GAGATCAAAC AATCCGAATC TGGGATATTA ACAGTGGAAA ATGCTTGAAA ATTCTTGAGG GTCACACAAA TGCTATACGC TCAATTGCTT TAAATTCCAC TGGCGAAATT ATTGCCAGTA GTAGTAGCGA CCACACAATA GGTTTGTGGG ATATCAAAAC AGGAAAATGT CTGAATATTC TCCGAGGTCA TACTGACAAT GTAATGTCAG TTGTCTTTAA TAATTCTGAT CGAATAATTG CTAGTGGTGG TGCTGACCAC ACAGTCAGAC TTTGGGATGT TCAATCTGGA GAATGCTTAA ATGTAATTCA AGGACACACT AATGTAGTAC GCTCAGTAGC CTTTAACTCC TCTGGTCAAA CTTTAGCTAG TGGTAGCTAT GATAAAACGT TGAAAATATG GGATATCAAT ACCTATGAAT GCTTAACAAC TGTCCAGGGT CATACCAATT GGATCAGTTC GGTAGCTTTT AACCCATCTG GTAGAACTTT TGCTAGCGGA GGGAATGATG CAACTATAAT CTGGGATGCC AACACAGGTA AATGTTTAAA AACCTTGCAA ATACATACCG CCTGGGTATT TTCAGTTGCA TTTAGTTCTT GTGGAAAGAT GCTTGCAAGT AGTAGTGCTG ACGCGAAAGT TAGATTGTGG AATATTGATA CAGGCGAATG CCTAAAAATT TTAAATGGTC ATACTTATTG GGTATTTTCA GTTGCTTTTA GTGCTGATGG TAAGCTGTTA GCGAGTAGTG GTTCGGATAA AACACTCAAG GTATGGTCAA TTGAAACAGG TCAATGCCTA ACAACTATTC ATGCAAACCA AGGTACAGTA CATTCAGTTG CTTTTAATCC CGTTAATAGA ACATTAGCAA ATGGGGGTTT TGACTCACAA GTAAAGCTAT GGGATGTAAA TACAGGTGAA TGCTTAAAAA TTCTACAGGG ACATAGTGGA ACAATTCGCT CGGTTGATTT TCATCCTGGT GGTAAAATTC TTGCTAGCGG GAGTGCTGAC TGCACAATAA GATTATGGGA TGTAGACACA AGCGAATGTG TAAAAATATT GCAAGGACAC TCGAAGGTAG TCCAGTCAAT AGCTTTTAGT TCTGATGGGC AAATCCTAGC TACAGGTAGT GAAGATTTTA CTATTAAGTT GTGGAATATT TTCACTGGAG AATGTTTTCA AACACTATGG GGACATACTA CTTGGGTATT GTCAGTGGCT TTTAGTCCTG ATTGTAAAAC CCTGATTAGT GGTAGCCAAG ATGAAACAAT AAAAGTATGG GATATTAAAA CAGGTGATTG TATCAAAACC TTAAGAAGCG ATCGCTTCTA TGAACGCATG AACATTACAA GGGTTAAGGG TTTAATCTCA TCTGAAATCG CTACCCTCAA ATCACTAGGT GCAATTGAGG AATAA
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Protein sequence | MSLINLDLVI SAVTSIANPV IKEKILRSET VIKLLQQFNL DPEHPPADFS GVYAYTLVEY GVGKPKAFLE LFRQEAIKQA FRKALGHNNP SILLSEVDAF LDSYTLGDEI RSLELDVRRE VAAFATVFIE VAKRSRTPAD VLMSQQIGSL HKRIASIQEQ LERLPTLEGI RTEIARLAAQ NYPALAGATT ENQCRAIALA QQMRGWFETL GYRLEKYEIW AEDYFEWIIN VPVRRSYDRI LVRGVAGEVR LSDVMALRQS VNQQKTDEGW LVSNRRIARA ARDEVKKEEN RHLDCFTFDE LIDLDADFTG YLDWLEAEIK RRKIDQKYVP LACTKEEIDP VTKRRIGVSR YEAEDGWIDG YIDLWLDDPA KEHISILGEF GTGKTWFVFH YAWTALQRYK DAQKRGVERP RLPLVITLRD FAKALNVENV LAGFFFTQHN IRLNSEVFDQ LNRMGKLLLI FDGFDEMAAK IDRQQMINNF WELAKVVVPG SKVILTCRTE HFPESKEGRA LLNAELQAST NKLTGETPQF EVLELEKFND EQIRQVLLYQ AEAATVEQVM DNSQLLDLAR RPVMTDLILE ALPDIESGKP IDMSRVYLYA VRRKMERDIK AERTFTSLAD KLYFLCELSW EMLSTDQMSL NYRLFPERIR RLFDSVVQEE KDLDHWHYDM MGQTMLVRNA DGDYTPAHRS LLEFFVAYKF AAELGALAED FTALAQAQSG LDSGATPVDY TWFGYFSRQW NDIIAPLKAF TRESFEKLRE TFGKAPLTKA VIDLLVPMLS NNESLISVIE RTRGQSEDAV GYIGGNAATL VLRIDPLGLE GKDLSGTVIK GADFTNVNLQ NVNFFAANLV NCAFTRTLGA VFSVAFNSDC KLLATGDGNG IVRLLDAATC KEILICKGHG SIIPCVAFSP SAQILASGSY DQTIKLWSIQ TGECLKILQG HVSGIRSIAF SPSGAILASS GNDNIIRLWN IDTGESLKTL HGHRDHVYSV AFDPSGMILV SGSGDQTIRI WDINSGKCLK ILEGHTNAIR SIALNSTGEI IASSSSDHTI GLWDIKTGKC LNILRGHTDN VMSVVFNNSD RIIASGGADH TVRLWDVQSG ECLNVIQGHT NVVRSVAFNS SGQTLASGSY DKTLKIWDIN TYECLTTVQG HTNWISSVAF NPSGRTFASG GNDATIIWDA NTGKCLKTLQ IHTAWVFSVA FSSCGKMLAS SSADAKVRLW NIDTGECLKI LNGHTYWVFS VAFSADGKLL ASSGSDKTLK VWSIETGQCL TTIHANQGTV HSVAFNPVNR TLANGGFDSQ VKLWDVNTGE CLKILQGHSG TIRSVDFHPG GKILASGSAD CTIRLWDVDT SECVKILQGH SKVVQSIAFS SDGQILATGS EDFTIKLWNI FTGECFQTLW GHTTWVLSVA FSPDCKTLIS GSQDETIKVW DIKTGDCIKT LRSDRFYERM NITRVKGLIS SEIATLKSLG AIEE
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