Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3259 |
Symbol | |
ID | 3680408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4058985 |
End bp | 4059371 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637718610 |
Product | HNH endonuclease |
Protein accession | YP_323762 |
Protein GI | 75909466 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00298488 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCTGTTG AACTTTACAA ACAAGTCAAA CAAAAACGCC AACATCCAAA CCTGCCTGTT TACCAATGGA AGCGTCAACC CCTTGAACAA TGGAAAATCA CTCGGCATTC TATCTACAGC AGAGACGAGG GATTGTGTCA AAGCCCAGAT AACCGACCAC CAAAAGTCAA TGGATTATGT CAAAGAACAG TCAGTTTAAA AACTGCCCAT ATCGACCACA TTCGCCCTTT GTCATCTGGT GGCAGTAACC ATGCGTCCAA CTTGAGAACT CTTTGCCCCG TCTGCCATGC GCTTCGGCTT GACCGCAAGC ATGATGGTAT GAGAAATAAG CTGGTCAAGA AAGGTTTAAT CCCTGTCAAC TGGAAACAGT TTGTTTGGGA TGGTTAA
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Protein sequence | MSVELYKQVK QKRQHPNLPV YQWKRQPLEQ WKITRHSIYS RDEGLCQSPD NRPPKVNGLC QRTVSLKTAH IDHIRPLSSG GSNHASNLRT LCPVCHALRL DRKHDGMRNK LVKKGLIPVN WKQFVWDG
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