Gene Ava_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3259 
Symbol 
ID3680408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4058985 
End bp4059371 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content45% 
IMG OID637718610 
ProductHNH endonuclease 
Protein accessionYP_323762 
Protein GI75909466 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00298488 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTGTTG AACTTTACAA ACAAGTCAAA CAAAAACGCC AACATCCAAA CCTGCCTGTT 
TACCAATGGA AGCGTCAACC CCTTGAACAA TGGAAAATCA CTCGGCATTC TATCTACAGC
AGAGACGAGG GATTGTGTCA AAGCCCAGAT AACCGACCAC CAAAAGTCAA TGGATTATGT
CAAAGAACAG TCAGTTTAAA AACTGCCCAT ATCGACCACA TTCGCCCTTT GTCATCTGGT
GGCAGTAACC ATGCGTCCAA CTTGAGAACT CTTTGCCCCG TCTGCCATGC GCTTCGGCTT
GACCGCAAGC ATGATGGTAT GAGAAATAAG CTGGTCAAGA AAGGTTTAAT CCCTGTCAAC
TGGAAACAGT TTGTTTGGGA TGGTTAA
 
Protein sequence
MSVELYKQVK QKRQHPNLPV YQWKRQPLEQ WKITRHSIYS RDEGLCQSPD NRPPKVNGLC 
QRTVSLKTAH IDHIRPLSSG GSNHASNLRT LCPVCHALRL DRKHDGMRNK LVKKGLIPVN
WKQFVWDG