Gene Ava_3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3193 
Symbol 
ID3680672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3967627 
End bp3968766 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content46% 
IMG OID637718543 
Productglutamate--cysteine ligase, putative 
Protein accessionYP_323696 
Protein GI75909400 
COG category[S] Function unknown 
COG ID[COG2170] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02048] glutamate--cysteine ligase, cyanobacterial, putative 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0063813 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000331865 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTCTTAT TGAAAGGCTT TGAAATTGAA ATGTACACCG GTACCCCTCA AGGTGAAATC 
GTCGGTCTCT CGGATAAAAT TGTGACTCAA TTAGACGGGT TTGTACGAGA ACCAGATAGC
CGGAACGTAG AATACACGAC AGAACCACTG CACAGTTATG AAAGTTTGCT GTGTGCTTTG
TTGCGTCCTC GACAGGCATT AAGAGACTAC CTCAAGCAAT TAGGTGACTA TACCCTCATT
CCTGGCAGCA CATTATCTTT GGGTGGAAGC GATCGCTTTT TCCGATCTGA CCCAGCCAAC
CCATATCATG ACTATATTGA GCAAACCTAC GGGACAAAAG TAGTTACCGC TAGCGTTCAT
ATAAACGTAG GTATTGACGA TCCAGAAGTG TTAATGCGGG CTTGTCGGTT AATTCGCGTC
GAAGCACCCC TATTTTTAGC CCTAAGCGCC TCATCTCCCT TCATCGATGG TAAAGCTACT
GGTTATCATT CCACCCGTTG GGGAGTCTTC CCCCAAACGC CAACTAACGT CCCACTATTT
ACCAGCCACG CCCATCATAT AGAGTGGGTA GAACAGCAAT TGGCTATCGG GACAATGCAG
AACGTCCGCC ACCTCTGGGT ATCAGTCAGA CCAAATGGTG ATCGCCGTCC CTATGATTTA
AACCGTTTAG AATTAAGAAT CTGTGATTTA GTTACAGATC CAATCTCCTT ATTGGCGATT
ACAGCCTTAC TAGAAGCGCG GTTATTACAA CTAATAGAAA ATCCCGACCT AGATCCCTTA
ACCCAAAGTA AGTTTTCCCC CGAAGAACTC GTAACCCTCA CTACTGAAAA CGAAGCCGCA
GCCGCTAGCG CTAGTCTCGA TGCCCAACTG ACACATTGGC AAGACGGTAG AAGCATCATA
GCTAGAGATT GGGTGAATGA AATATATCAA GAAGTTTGGG CGATCGCTAA AAAACATGGC
TTTAGCTGTT TCCTCTCCCC TCTCCAGAAA ATTTTACGTG AAGGTAACGA AGCCCAACAC
TGGCTACAGC TGCATAAAGT CGGCTTCGAC ACCCAATGCG TTATCACCCA AGCAATCAGT
ACCACCCAGG AACGGGAACT TGAACTGCAA AATAAGTTGT GTACACAGCT AAAGGGGTAA
 
Protein sequence
MVLLKGFEIE MYTGTPQGEI VGLSDKIVTQ LDGFVREPDS RNVEYTTEPL HSYESLLCAL 
LRPRQALRDY LKQLGDYTLI PGSTLSLGGS DRFFRSDPAN PYHDYIEQTY GTKVVTASVH
INVGIDDPEV LMRACRLIRV EAPLFLALSA SSPFIDGKAT GYHSTRWGVF PQTPTNVPLF
TSHAHHIEWV EQQLAIGTMQ NVRHLWVSVR PNGDRRPYDL NRLELRICDL VTDPISLLAI
TALLEARLLQ LIENPDLDPL TQSKFSPEEL VTLTTENEAA AASASLDAQL THWQDGRSII
ARDWVNEIYQ EVWAIAKKHG FSCFLSPLQK ILREGNEAQH WLQLHKVGFD TQCVITQAIS
TTQERELELQ NKLCTQLKG