Gene Ava_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3171 
Symbol 
ID3680727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3936289 
End bp3937494 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content45% 
IMG OID637718520 
Productadaptive-response sensory kinase 
Protein accessionYP_323674 
Protein GI75909378 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.109214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAAAC ACGATTCCAT GCAAGTTTCC CAGGATCAGC CTATTTATTC TGAGGCTCCA 
CTCCAGCTGT TATTGTTCGT CGATGGACGA CCCAAATCCA AACAGCAGGT GCAGCGTATC
CGTGCTTACT TAAAAGACTT GCAGGCCGAG TATAACTTTG AACTTCAAAT CATTGATGTC
GGGCAACAAC CATACTTGGC AGAACATTTT AAGTTAGTAG CAACACCAGC TCTAATTAAA
ATTCATCCAG AACCCAGGCA GATTTTAGCC GGTAGTAACA TCATCACCCA ACTGAAAAAT
TTGTGGCCGC GCTGGCAAGC AGCCGTAGAT ACCTATGTAA AGTTGCAAGA GGACTTGCAA
GAACGTGTAG ATGATAATGG CCGGGTAGCA CAACCTACAT CTACTATCAA TTCTGTTGCT
GTTTCGGCGG AACTGTTAAG GCTTTCAGAC GAAATATTCA ATCTCAAACA AGAGAAAGAA
AAATTACTAG AGCAGTTACA GTTTAAAGAC CGCGTAATTG CCATGTTAGT TCATGACCTC
CGCAATCCCC TCACAGCAGC AGCGATCGCT ATTGAAACCC TACAATCTAA CTACAACCCA
GATATCGGCC AATTTCAACG CTTAAAACCC GCCTTAGTAG TCAACCTATT AAGACAAGCC
CGCACTCAAG CTAAAACAAT TGATAAAATG ATTGCGGATC TTTTACAGGT GGGTCGCGGT
ACTGATACAG AGCTAATAAT TATACCACAA AAAACGGAAA TAGGTCTACT CTGTTTAGAA
GTACTAGGAG AATTGCGCGA TCGCTACACC ACCAAAGCGC AAAAAGTAGA AACAGACATT
CCCCAAGATT TGCCCTGTGT CTACGCCGAC CCCGAACGCA TCCGCCAAGT ACTGATCAAT
CTGTTAGATA ATGCCATCAA ATATACTCCA GAAGGTGGCA CAATTAGCAT TGCTGGATTA
CACCGCACTA CCCAAAAAGT CCAATTTAGT ATTGGCGACA CCGGCCCCGG TATTCCTACT
GACAATCGAG AGCGTATATT TGAAAATCAC TATCGCTTAG AACGAGATGA AGCCAAAGAA
GGCTACGGCA TCGGTCTTTC CTTATGCCAA CGCATAATAC GCGCCCACTA CGGTCAAATT
TGGGTAGACT CCAACCCCCA CGGTGGAGCG TGGTTCCACT TCACCCTGCC CGTTTATCCA
TCTTAG
 
Protein sequence
MLKHDSMQVS QDQPIYSEAP LQLLLFVDGR PKSKQQVQRI RAYLKDLQAE YNFELQIIDV 
GQQPYLAEHF KLVATPALIK IHPEPRQILA GSNIITQLKN LWPRWQAAVD TYVKLQEDLQ
ERVDDNGRVA QPTSTINSVA VSAELLRLSD EIFNLKQEKE KLLEQLQFKD RVIAMLVHDL
RNPLTAAAIA IETLQSNYNP DIGQFQRLKP ALVVNLLRQA RTQAKTIDKM IADLLQVGRG
TDTELIIIPQ KTEIGLLCLE VLGELRDRYT TKAQKVETDI PQDLPCVYAD PERIRQVLIN
LLDNAIKYTP EGGTISIAGL HRTTQKVQFS IGDTGPGIPT DNRERIFENH YRLERDEAKE
GYGIGLSLCQ RIIRAHYGQI WVDSNPHGGA WFHFTLPVYP S