Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3171 |
Symbol | |
ID | 3680727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3936289 |
End bp | 3937494 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637718520 |
Product | adaptive-response sensory kinase |
Protein accession | YP_323674 |
Protein GI | 75909378 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.109214 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGAAAC ACGATTCCAT GCAAGTTTCC CAGGATCAGC CTATTTATTC TGAGGCTCCA CTCCAGCTGT TATTGTTCGT CGATGGACGA CCCAAATCCA AACAGCAGGT GCAGCGTATC CGTGCTTACT TAAAAGACTT GCAGGCCGAG TATAACTTTG AACTTCAAAT CATTGATGTC GGGCAACAAC CATACTTGGC AGAACATTTT AAGTTAGTAG CAACACCAGC TCTAATTAAA ATTCATCCAG AACCCAGGCA GATTTTAGCC GGTAGTAACA TCATCACCCA ACTGAAAAAT TTGTGGCCGC GCTGGCAAGC AGCCGTAGAT ACCTATGTAA AGTTGCAAGA GGACTTGCAA GAACGTGTAG ATGATAATGG CCGGGTAGCA CAACCTACAT CTACTATCAA TTCTGTTGCT GTTTCGGCGG AACTGTTAAG GCTTTCAGAC GAAATATTCA ATCTCAAACA AGAGAAAGAA AAATTACTAG AGCAGTTACA GTTTAAAGAC CGCGTAATTG CCATGTTAGT TCATGACCTC CGCAATCCCC TCACAGCAGC AGCGATCGCT ATTGAAACCC TACAATCTAA CTACAACCCA GATATCGGCC AATTTCAACG CTTAAAACCC GCCTTAGTAG TCAACCTATT AAGACAAGCC CGCACTCAAG CTAAAACAAT TGATAAAATG ATTGCGGATC TTTTACAGGT GGGTCGCGGT ACTGATACAG AGCTAATAAT TATACCACAA AAAACGGAAA TAGGTCTACT CTGTTTAGAA GTACTAGGAG AATTGCGCGA TCGCTACACC ACCAAAGCGC AAAAAGTAGA AACAGACATT CCCCAAGATT TGCCCTGTGT CTACGCCGAC CCCGAACGCA TCCGCCAAGT ACTGATCAAT CTGTTAGATA ATGCCATCAA ATATACTCCA GAAGGTGGCA CAATTAGCAT TGCTGGATTA CACCGCACTA CCCAAAAAGT CCAATTTAGT ATTGGCGACA CCGGCCCCGG TATTCCTACT GACAATCGAG AGCGTATATT TGAAAATCAC TATCGCTTAG AACGAGATGA AGCCAAAGAA GGCTACGGCA TCGGTCTTTC CTTATGCCAA CGCATAATAC GCGCCCACTA CGGTCAAATT TGGGTAGACT CCAACCCCCA CGGTGGAGCG TGGTTCCACT TCACCCTGCC CGTTTATCCA TCTTAG
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Protein sequence | MLKHDSMQVS QDQPIYSEAP LQLLLFVDGR PKSKQQVQRI RAYLKDLQAE YNFELQIIDV GQQPYLAEHF KLVATPALIK IHPEPRQILA GSNIITQLKN LWPRWQAAVD TYVKLQEDLQ ERVDDNGRVA QPTSTINSVA VSAELLRLSD EIFNLKQEKE KLLEQLQFKD RVIAMLVHDL RNPLTAAAIA IETLQSNYNP DIGQFQRLKP ALVVNLLRQA RTQAKTIDKM IADLLQVGRG TDTELIIIPQ KTEIGLLCLE VLGELRDRYT TKAQKVETDI PQDLPCVYAD PERIRQVLIN LLDNAIKYTP EGGTISIAGL HRTTQKVQFS IGDTGPGIPT DNRERIFENH YRLERDEAKE GYGIGLSLCQ RIIRAHYGQI WVDSNPHGGA WFHFTLPVYP S
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