| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3127 |
|---|
| Symbol | cobD |
|---|
| ID | 3680795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 3882786 |
|---|
| End bp | 3883748 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637718471 |
|---|
| Product | cobalamin biosynthesis protein |
|---|
| Protein accession | YP_323630 |
|---|
| Protein GI | 75909334 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
|---|
| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACA ACATCTATGT CTTAATCGTT GCTGTAATTT TAGATTATTT AATAGGTGAT
CCTTGGGGTT GGCCTCATCC GGTGCAAATT ATGGGATGGG TAATTTCGTG GTTGAGCAAA
ATTTTTCTGC AACTGTGTCA AAAATCTCTA ACACAACGCC TAGCTGGGAT TGTTCTCGCA
ATAATTTTGA TTGTTGGTAG CGGTGGGGTT GGTTGGTTAA TCGTGCAAAT GACGAGATGG
CTAAATCCTG TTTTGGCGAT CGCACTAGAA AGTATCATGT TAGCTAGTTG TTTTGCTTTA
AAAAGTCTAG GCAAAGCAGC TATTGATGTT TTACGACCTT TAAAAGCAGG GGATTTAACA
CTAGCTCGGC GGATTTTGAG TAATTATGTT GGTCGAGATA CAGACAACCT ACCAGAATCA
GAAATCCTCC GAGCAGTTTT AGAAACAGTT ACAGAGAATG CTACAGATGG GGTGATGGCT
CCATTGTTTT ACGCTATTGT CGGTATCTGC ATTCCCCATG TGGGGCCAGT TCCTCTGGCT
TTGGCATATA AAGCCAGCAG CACCCTCGAT TCGATGGTGG GTTACAAAGA AGCACCATAT
ACATATTTAG GATGGTTCAG CGCGCGACTA GAAGATTACT TAACTTGGGT ACCTTGTCGC
TTGACAGTGA TAACTTTAGG ATTATTATCA GGGAAGCCTG GGGATGTGTG GCGAATTTGC
CGCCGTGATG CAATTAATGA TCCTAGTCCC AACTCAGGGT GGAGTGAATG CGCCTATGCA
GCCATTTTGG GTGTGCAGAT GGGGGGAACA AATTGGTATC GTGGAATAGC CAAGCAAAAA
CCGCTTTTAG GAGATCCCAC TTCTCCCATC AACCCCCAAC ACATTCAAAC AGCTTTGCAA
CTAACTAGAT ATAGCTTTTT GCTCTGGCTA GGTGTGGCGA TCGCTATACT CCTGATACGC
TAA
|
|---|
| Protein sequence | MTNNIYVLIV AVILDYLIGD PWGWPHPVQI MGWVISWLSK IFLQLCQKSL TQRLAGIVLA
IILIVGSGGV GWLIVQMTRW LNPVLAIALE SIMLASCFAL KSLGKAAIDV LRPLKAGDLT
LARRILSNYV GRDTDNLPES EILRAVLETV TENATDGVMA PLFYAIVGIC IPHVGPVPLA
LAYKASSTLD SMVGYKEAPY TYLGWFSARL EDYLTWVPCR LTVITLGLLS GKPGDVWRIC
RRDAINDPSP NSGWSECAYA AILGVQMGGT NWYRGIAKQK PLLGDPTSPI NPQHIQTALQ
LTRYSFLLWL GVAIAILLIR
|
|---|
| |