| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3089 |
|---|
| Symbol | |
|---|
| ID | 3681011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 3839529 |
|---|
| End bp | 3839993 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637718434 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_323593 |
|---|
| Protein GI | 75909297 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0429158 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATA ACTCGGAAGA ACTGCATCCA CAAAACGTTA CAAATTACTT TCAGTCTTTA
GATGGGTTGC ACATTTTAGC AGTAGATGAT AATGCTGACA GTCTATTTTT AACTACCTGC
GTTTTAGAAA GCTATGGTGT TCAAGTAACA ACAGCTACAT CAGCATTGGA AGCACTAGAA
ACAACCAAAC AATTAAAGTT TGATATTTTG ATTTTTGACA TTGCCATGCC CAATATGGAT
GGATATACAT TAGTACAAGA AATTAGAAAC AATGCCCTAT TAGAGAACAG GAACATTCCG
GCGATCGCTC TCACGGCTTT AGGCTCAGAA GACGCTTTGA ACATGGCTTT CATGTCTGGA
TTCCAAGGCT ATGTTAATAA ACCTTTAGAC CCTAATATTC TCGTAGCAGA AATTCTCAAG
CTCATAGGAA GTTCCGTATT AGAAAATGGG ACGAATAGTC ATTAG
|
|---|
| Protein sequence | MANNSEELHP QNVTNYFQSL DGLHILAVDD NADSLFLTTC VLESYGVQVT TATSALEALE
TTKQLKFDIL IFDIAMPNMD GYTLVQEIRN NALLENRNIP AIALTALGSE DALNMAFMSG
FQGYVNKPLD PNILVAEILK LIGSSVLENG TNSH
|
|---|
| |