Gene Ava_2937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2937 
Symbol 
ID3681366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3641197 
End bp3641940 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content45% 
IMG OID637718284 
Productphycobilisome linker polypeptide 
Protein accessionYP_323443 
Protein GI75909147 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATCC CATTACTTGA ATACAAACCC AGTTCTCAAA ACCAGCGTGT TCCTGGGTAC 
GAAGTTCCTA ACGAAGATAC CCCCAGAATC TACCGCATCG AAGATGCCGC CTACGATAGC
GAACTCAAAG AAATCATTTG GGCTACTTAT CGGCAAGTAT TTAGCGAACA CGTCATTTTG
AAATTCTTCC GCCAGGGCAA CCTAGAATCC CAACTGAAAA ATCGGGCAAT CAGCGTCCGC
GACTTCGTTC GGGGTCTAGC AAAATCAGAG GCTTTCAAGA CTTTAGTCAT CAAGAGTAAC
TCTAATTACC GCCTTGTAGA ATTAGCACTG AAACGCCTTT TGGGTCGTGC GCCTTATAAT
AAGGATGAAG AAATTGCATG GTCAATCAAG ATAGCAACCA ATGGTTGGGA TGGCTTTGTT
GATGCGCTGC TAGATTCGGA AGAATATCAG AGCAACTTCG GTGAGAACAT AGTCCCCTAC
CAACGGCGAC GCTACAAAGA TAGACCCTTC AATCTAGTCA CCCCACGCTA CGGCAACTAC
TGGCGCGATA AGTTGGAAAG TGAGCGCTAC ATAGAAGGTG ATATTAAGAA TTTCTTGGAA
TTAGCTAAAT CCATAGAAAT TAAGACCGTC ACCTTTACAC CAGTCAGCAC TGCCAATATT
AACATTCCCG ATACAACTCG GAACACCACA CCAACAGGGA TTCCCATCTC CGTAAATCCT
AGCGCCAATT TCCCCGTGCG GTAA
 
Protein sequence
MSIPLLEYKP SSQNQRVPGY EVPNEDTPRI YRIEDAAYDS ELKEIIWATY RQVFSEHVIL 
KFFRQGNLES QLKNRAISVR DFVRGLAKSE AFKTLVIKSN SNYRLVELAL KRLLGRAPYN
KDEEIAWSIK IATNGWDGFV DALLDSEEYQ SNFGENIVPY QRRRYKDRPF NLVTPRYGNY
WRDKLESERY IEGDIKNFLE LAKSIEIKTV TFTPVSTANI NIPDTTRNTT PTGIPISVNP
SANFPVR