Gene Ava_2893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2893 
Symbol 
ID3681398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3597575 
End bp3598399 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content39% 
IMG OID637718238 
Product3-beta hydroxysteroid dehydrogenase/isomerase 
Protein accessionYP_323399 
Protein GI75909103 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000508224 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATATTG CAATTATTGG CTGTGGCTAT GTTGGTTGTG CGATCGCCCA ACATTGGCAA 
CAAAACCCTC ATCTGTTTAT AACTGCTACA ACAACTACAT CTGAACGTGT GACAGCATTA
CAAAAAGTGG CACACAAGGT TGTACTAACT CAAGGAGATG ATCTAGATAA ATTAACAAAT
ATTCTCCAAA ATCAAGATGT TGTCTTGTTG AGTGTGGGAG CAAAAGGCGG CGACTTATAT
GAAGCAGCAT ACCTCAACAC AGCTAAAACT TTAGTCTCCG CTTTACAGCA AAATTCTCAT
GTTAAACAAC TTATATATAC AAGCAGCTAT TCGGTTTATG GTAACAAAAA TGGTGAATGG
GTAGATGAAG AAACACCTAC TATGCCCGTC AGCCGCAATG GAGAAATTCT TCAGGAAACA
GAAGATATTT TACTATCAGC TTCTAGCGTC AATCTTCGTG TTTGTATCTT ACGTCTAGGA
GGCATTTATG GAGCTGGACG GGAACTAGTG AAAATATTTA GTAGAGTTCC CGGTACAACT
CGTCCTGGTG ATGGCAGTGA TACCACAAAC TGGATTCATT TAGATGATAT TGTTGGGGCT
ATAGAATTTG TCCGCAACAA CTCGTTACAA GGCATTTACA ATCTAGTAGA TGACGCGCAT
TTACCGAGTA GAGAATTGTT AGATACTCTG TTGAGTAAAT ATAATCTCAC TCAGGTAATT
TGGGATGAGA TCCTCAAGAG TAATCGTCCC TATAATGCCA AAGTTTCCAA TCGCAAAATC
AAAGAAGCTG GATATCAATT GATTCATCCA TATACGGTTT TTTAG
 
Protein sequence
MNIAIIGCGY VGCAIAQHWQ QNPHLFITAT TTTSERVTAL QKVAHKVVLT QGDDLDKLTN 
ILQNQDVVLL SVGAKGGDLY EAAYLNTAKT LVSALQQNSH VKQLIYTSSY SVYGNKNGEW
VDEETPTMPV SRNGEILQET EDILLSASSV NLRVCILRLG GIYGAGRELV KIFSRVPGTT
RPGDGSDTTN WIHLDDIVGA IEFVRNNSLQ GIYNLVDDAH LPSRELLDTL LSKYNLTQVI
WDEILKSNRP YNAKVSNRKI KEAGYQLIHP YTVF