Gene Ava_2870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2870 
Symbol 
ID3681473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3564944 
End bp3566170 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content46% 
IMG OID637718217 
Producthypothetical protein 
Protein accessionYP_323378 
Protein GI75909082 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGA GAAATATTCT TGCTAAAAAA TTACTTTTTG GCATGGTTTT GCTAGGACTT 
TCTACTTGTA ACTTACCAAC AACTGAGTCC GCAGATAATA GCAATCAAGA AACGCAAGCA
GCCGCACCAA TTAGTCAACA AACTGCTACT AACAATCAAG CCTGCACTCT AGTAGAAAAT
GGCTTCGGTT CACCAGGAAA GGTAAATGTG CGTGCCGAAG AAGTAGTCAC AGGGTTAGAA
GTGCCTTGGG GAATTGCTTT TCTGCCAAAT CGAGATATGT TAGTGACCGA ACGTCCTGGA
CGAGTTCGCC TGGTGCGGGA TGGTAAACTT GTTTCTCAGC CAGTAGCTAC AATTAATGTT
ACTGATAGCG GTGAAGATGG TTTGCTTGGG ATTGCAACTC ATCCCAACTT TGCCGAAAAC
AGATTTTTTT ATGTTTACTA TACTGCTGAT AGAAATGGTT CGCAGGTAAA TCGCGTTGAA
CGATGGCGAC TATCTGAGAA CGGACTCACT GCTTCACCAG ATAGGGTGAT TGTTGATGAT
ATTCCTGTAG CGCAATTTCA CAATGGGGGT CGCATCCGCT TCGGCCCTGA TGGAATGTTG
TACATTGGGA CTGGTGATGC GAGGAATCCA CAAATTTCCC AGGATGTTAA TAGCCTAGCT
GGAAAAATTC TGCGTGTGAC TCCGGATGGA CAAGTGCCAC AGGACAATCC CTTTGAGAAA
AATCCTGTCT ATATCACTGG AATTCGCAAC ACTCAGGGGT TTGATTGGCG GGATCAATCA
ACTCTATGGG TAACAGACCA CGGCCCTAGC GGTGATTTAG GCAGAAGAGG TCACGATAAA
CTCAGTCTAG CCAGATCTGG CGACAACCTT GGCTGGCCTA CTATCTACCG TTGTGAATCA
GGAGAAGGAC TTGTGACTCC CTCGATTGTT TGGCGTGAAG CTCTACCGCC TGGGGGAGCA
GCTATTTATA CAGGTAATAC TATTCCTGAG TGGAGAGGTA GCTTGATTAT TGCCACGCTT
CGTTCAGAAC ACTTACAGCG CGTCGTCTTC GCTCCTCAGT CGCCCCAACA AGTCGAGCGT
CATGAGGTGT ATTTACAAGG TAAATATGGA CGACTGCGAG AGGCAATTAT GGGGCCAGAT
GGTGAATTAT ATGTGACAAC CAGTAACTGT GATGGACGAG GGAATTGCCC GCCACAACAG
GACAAGATTA TCCGTATTAC TAGATGA
 
Protein sequence
MQLRNILAKK LLFGMVLLGL STCNLPTTES ADNSNQETQA AAPISQQTAT NNQACTLVEN 
GFGSPGKVNV RAEEVVTGLE VPWGIAFLPN RDMLVTERPG RVRLVRDGKL VSQPVATINV
TDSGEDGLLG IATHPNFAEN RFFYVYYTAD RNGSQVNRVE RWRLSENGLT ASPDRVIVDD
IPVAQFHNGG RIRFGPDGML YIGTGDARNP QISQDVNSLA GKILRVTPDG QVPQDNPFEK
NPVYITGIRN TQGFDWRDQS TLWVTDHGPS GDLGRRGHDK LSLARSGDNL GWPTIYRCES
GEGLVTPSIV WREALPPGGA AIYTGNTIPE WRGSLIIATL RSEHLQRVVF APQSPQQVER
HEVYLQGKYG RLREAIMGPD GELYVTTSNC DGRGNCPPQQ DKIIRITR