| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2834 |
|---|
| Symbol | |
|---|
| ID | 3681476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 3509286 |
|---|
| End bp | 3510503 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637718181 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_323342 |
|---|
| Protein GI | 75909046 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.161875 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATC GGCTACCCCT CATCTCAGGC GCATTATTTT TATGTGTGTT CTTGAGTATT
TTCAACGAGG TTTTACTGTC ACCCTTTTAT CCCCAGTTTT TCCGTAAAGT CTTCGGCGTG
ACAGATTTAG CCTACACCGG TTACTACATT TTTGTGTGTC GGTTAACCGT GGTGCTGTGT
GCGCCTGTGT GGGGTGTGTT ATCGCGCCGC TTTGAAGTCA AACACCTACT TTTTGTTGGA
CAATTGGGTG CAGCCTTCAT GACGGCCTTG ATGGGTACAA GCACCAGTGC AGAGCAATTT
TTGATTTACA CCATCCTGCT GTTACTGTGC AAAAGCAGTT ATTTGCTAGT GTATCCCCTC
ATTATCCAAC TAGGTGGGGA AGAAAAACGA ACTGCGATCG CCGGCACATA CCAAGCCGTG
TTTCATAGTG CAATCATCAT TGCTACCATC GTCGGCGCAT TTATGGTCAA TATAAATACA
CCCTTAATTA TTTTCTACGG GATTGCCGCA GCCGATCTTT TACAGCTTGC CGTCTGTGCT
TATATATTGC GTGGTGTATC TACCAAAGAA GCAGGGGGGC AGGGAGCAGG GGGCAAGGGA
GATGGGGGTA GGGGAGAAAA TCAGCTTGTA GCACCTAACC AACTGGGTTA TATCATCACT
ATCGGCGTAG TCATTCTTAC TTTCCAGCTA GCGAATAATC TAGTTCGTCC CTACTTCACA
GAGTATGTTA CCGCCGAACC ATTAAACGTT GACCTATTCA CTGGTAGCTT GTTATTTCTG
ATACCTAGTG TAATGGTGAT CGCTGCCTTA CCCTACATCC GTCAAGCCTG TCGTCCCGAA
CGCCTCCAAA CCATCTACTT AGCAAGTTTA AGCCTACTCA TCGTCAGCTT AGGCCTACAA
GGACTCTCAT CTAACCTACC CTTACTGATC CTAGCGAGGA TAGTTTATGG CTTCTTCCTA
GCAGTCACCC AAGCCGCCTT AGAACTGCAA ATATTCAACC AAAGCACAGC CAAACACCTC
CACTTCAACT ACAGCCTCGC CATCTCCTTC GCCAACATCG GACACTTAGG CGCACCCCTC
CTAGCCTCCT GGCTAGTCAA CACCCACAGC CTAGCCTCCC CATTCATCGC CGCCACCATA
ATTTGTTGCT TAAACCTCCT ATTCTTTCGC TATGTTCCGA AGACAGGCGG CAGGCGGCAG
GCAGCAGAAG GATTTTAA
|
|---|
| Protein sequence | MKHRLPLISG ALFLCVFLSI FNEVLLSPFY PQFFRKVFGV TDLAYTGYYI FVCRLTVVLC
APVWGVLSRR FEVKHLLFVG QLGAAFMTAL MGTSTSAEQF LIYTILLLLC KSSYLLVYPL
IIQLGGEEKR TAIAGTYQAV FHSAIIIATI VGAFMVNINT PLIIFYGIAA ADLLQLAVCA
YILRGVSTKE AGGQGAGGKG DGGRGENQLV APNQLGYIIT IGVVILTFQL ANNLVRPYFT
EYVTAEPLNV DLFTGSLLFL IPSVMVIAAL PYIRQACRPE RLQTIYLASL SLLIVSLGLQ
GLSSNLPLLI LARIVYGFFL AVTQAALELQ IFNQSTAKHL HFNYSLAISF ANIGHLGAPL
LASWLVNTHS LASPFIAATI ICCLNLLFFR YVPKTGGRRQ AAEGF
|
|---|
| |