Gene Ava_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2813 
Symbol 
ID3681649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3482744 
End bp3483226 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content46% 
IMG OID637718159 
ProductMarR family transcriptional regulator 
Protein accessionYP_323321 
Protein GI75909025 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0313232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.34427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCG ATAAATCCTC TCAAGAAGGT GCAACTTCCG CAGAATGTGC CGCCAAAGTA 
ATGGAAACTG TACCCTCAGT CATGAGGTTT ATCCGAGCTA AGATGCGAGC GCACAAAGCC
GCTTTTTTAT CGATACCACA ATTGCGATCG CTAGCATTTC TCAATCGTAA CCCCGGAGCG
TCTTTATCTG ATCTAGCAGA ACATTTAGGT GTCACTTCTG CTACAGCATC AGCCACAATC
GAACGGCTAG TACAACGGGA TTTAGTGCAA CGGATTCACC ATCCACAAGA GCGCAGACGT
ATTGTCCTCA CTCTGACTGA TGAGGGAAAA TCTATTTTGC AACAATCCTT AGATGAAACA
CGCGCCCAAA TTGCTGATCT TTTGGAAGGT CTGACAGCCG AGGAAATATC CCAAGTTGAA
AAAGGATTGG CTTTACTCAA AAATGTCTTC GATCAAACGG AATTCACCCC CCCCAAGCGC
TGA
 
Protein sequence
MKLDKSSQEG ATSAECAAKV METVPSVMRF IRAKMRAHKA AFLSIPQLRS LAFLNRNPGA 
SLSDLAEHLG VTSATASATI ERLVQRDLVQ RIHHPQERRR IVLTLTDEGK SILQQSLDET
RAQIADLLEG LTAEEISQVE KGLALLKNVF DQTEFTPPKR