| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2806 |
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| Symbol | |
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| ID | 3681642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3465403 |
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| End bp | 3467304 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637718152 |
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| Product | sensor protein |
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| Protein accession | YP_323314 |
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| Protein GI | 75909018 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4252] Predicted transmembrane sensor domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.682487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.55178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGGC TTAATACAAG AAAAATTAAG CAAGAAATTA TTATTTTGCG ACAGGTAGCT
ATACCTGGAA TGACTGTTTT ATTTATTATT ATAATTGCCA GATTATCCGG TTTATTGCAG
GGCTTAGAAT TGATATTATT TGATACTTTT TTACGGTTGC GCCCAGCCGA AATTACTGAC
CCAAAAATAG TGATTATTGG AATTAATGAA AATGACATTC GTAGTTTAGG AACTTACCCG
GTGCCAGATG CAGAAATTGC TTCATTGATT CAAAAAATTC AGATTTACAA ACCCGCAGTG
ATTGGACTTG ATATTGTAAA AAATGTCCCA ATAGAACCAG GACATCAAGA ACTTATCAAA
GCATTTCAAC AATATCAAAA CCTGATTGGT ATTGAGAAAG TTTTACCACC TGACGAAATT
TCTCCACCAC CAAACCTACC ACCAAAACAA ATAGGTTTTT CTGATGTAAT CGCAGATAGA
GATGGTAACT ATCGTCGCTA TTTACTTTTG ACCGCCTCAC CCCAAAATCC CGAAAATCCC
CAAGATGATA AATATTCCCT AGCCCTAAGA TTAGCACAAG GTTATTTAGC TACTAAAAAT
ATAATTATAG ATACGGGAAA ATATAATTCT TATATTCGAT TTGCTGATAT AGAACTGCCT
ATATTTTCTG CAAATACTGG TGGATATGTA GGAGAAAATG ATACTGGCTT AAAAATGCTA
GTTAATTTTC GCAGTGGTAA GCAACCATTT CGGTTTATTT CTCTAAATGA TATTAAAAGT
AGTAAATTTG ATCCAAATTG GCTCAAGCAA AAAATAATCA TAATTGGTGT AACTGCTGCT
AGTAGTAATG ATTTATTTAA TACTTCAGCA ACTACTAGCT CAAAAATTCA TAGTCAAATT
TATGGAGTCG AATTTCATGC CCATGTTACT TCGCAAATAA TTAATGCAGT TGTCAATGAT
AGACCATTAT TAAAAGTTTG GTCTGACGGG TGGGAATATT TATGGTTAGT GATTTGGGGT
GTGACAGCAA TAATTATTGC TAGAGTGACA GAGACTTTTC GCAGAAATTT ATTAACTATT
ATATTAATAA TATTTTGCTT AATAAGTATC AGCTACTTAC TCATCTTATT AGGTTGGTGG
ATTCCTCTAG CACCGACTTT ACTAATTTTA GGAATTAACG GTTTGGGAAT CAGTGTCTTT
GCTTTTCATG AATATAAACA AAATCAAATA AAAATACAGC TAAGTCAACA CACTATAGAG
CATACATTTA CACTTATTCA TAATGGACCG TTACAGACTT TAGCTAATAT ATTGAGGCAG
GTAGGTACAG ACAACTTACA AAACGATAAA TTAATATTGC AGTTAGAAAA ACTTAATTCT
GAAATTCGTT CTATCGGTGA ATATTTAAGG ATCGAAGCAT TAACCCCCAA TGAAAGCTTG
CGCTTAGGTA GCCGTGTCAA AATTGACTTA AAAAGACCAA TCCATGAGCT ATTTTACGAA
GTATACACAA GTACTATTGC CAGAGATGAT TTAGAGTATT TCTATAACAT TAACGTCAAA
GTCCGCACAT TTGAGCCTAT AGATGAAAAA TACTTAAATA TAGAAAAAAA ACAAGAGTTG
TGCCTATTTT TGGAAGAAGC TTTATGTAAT GTAGGAAAAC ACGCCAAAGG TGTCAAACGA
ATTGAAGCCA TTGGTAAGAA AGAACGAAGT TCATATACTT TGATGATTAA AGACAATGGT
TGTGGACTTA CTTCATTTTC TGAAAATAAA GGGATGAAAC AACTTAAAAA TATTGCTAAA
AAACTAGGAG GAAATTTCAA GTGTGAATCC CTTTACCCCA AAGGAACAAT CTGTGAAGTT
ACATGGAAAT TAACAAACAA TAAAAATAAC TATTTGAATT AG
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| Protein sequence | MFRLNTRKIK QEIIILRQVA IPGMTVLFII IIARLSGLLQ GLELILFDTF LRLRPAEITD
PKIVIIGINE NDIRSLGTYP VPDAEIASLI QKIQIYKPAV IGLDIVKNVP IEPGHQELIK
AFQQYQNLIG IEKVLPPDEI SPPPNLPPKQ IGFSDVIADR DGNYRRYLLL TASPQNPENP
QDDKYSLALR LAQGYLATKN IIIDTGKYNS YIRFADIELP IFSANTGGYV GENDTGLKML
VNFRSGKQPF RFISLNDIKS SKFDPNWLKQ KIIIIGVTAA SSNDLFNTSA TTSSKIHSQI
YGVEFHAHVT SQIINAVVND RPLLKVWSDG WEYLWLVIWG VTAIIIARVT ETFRRNLLTI
ILIIFCLISI SYLLILLGWW IPLAPTLLIL GINGLGISVF AFHEYKQNQI KIQLSQHTIE
HTFTLIHNGP LQTLANILRQ VGTDNLQNDK LILQLEKLNS EIRSIGEYLR IEALTPNESL
RLGSRVKIDL KRPIHELFYE VYTSTIARDD LEYFYNINVK VRTFEPIDEK YLNIEKKQEL
CLFLEEALCN VGKHAKGVKR IEAIGKKERS SYTLMIKDNG CGLTSFSENK GMKQLKNIAK
KLGGNFKCES LYPKGTICEV TWKLTNNKNN YLN
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