Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2788 |
Symbol | |
ID | 3681721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3441135 |
End bp | 3442325 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637718134 |
Product | hypothetical protein |
Protein accession | YP_323296 |
Protein GI | 75909000 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0640991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTAGCC TCAAACTCTC GCTGACTGGA TTGCAAATCA TCAAACAAGC TCGAAGCGAA AAAGGTTGGA CAATTGATAA TCCATGTTGG TTAGAACAAG CAAGTCAAGT GCTTGAGCCT GGGCGTAACT GGGAAAATGC GGAGGTTTTT GCAGCCGGGG TATCTTTAGC CACCTGGAAA CGCTTCCTCA AAGGTGATGC GATCGATGCG TCGGTATTTA AAGCCTTTTG TCAGGTTTTG GGATTGAATT GGCAAGACTT AGTGGAACGT CCCCCTAACT CATTCATCAT TGGGACAACC CAAATCCCCA ATATTCCCTT ATTTTTTGGA CGACGTTATG AACTGACAAC ACTCAGCCAA GCAATTGAAC AAGGAACACG CCTAATTGCT ATTACAGGGA TTGGGGGTAT GGGGAAAACG GCTTTAGCCA CAAAGTTAGT AGAAAGCAGG TCATCTCATT TTTCTCAAAC CCTATGGTTT TCGTTTCACC ACAACCCACC TGCCAAGGAT AAAATACCAA CTTTAGTACC ACAAACCCTG ATGGTTTTTG ATGGTTGGGA TGGCATTTTG GGGGGTAATC GAGGGGGACA ATATCGCCCA GAATATGAAC CATACGCAGA TTTTCTCCGC ACAGTGGTAC AAACTACTCA TACTAGTTGT GTAATTATCA CTAGCCGAGA ACAACCAGAA GGGTTAAATA TTTTAGGCGC TGGGGGTGCA GTGATTTTCC CCCTTGGTGG ACTAATGGAA GGTGCTATTG AGCTTTTGCA GCATCATCAA CTGACTTTTA ATGCTCAACA GTGGATTACG CTAGTCAATC AATATGGTGG TAATCCCTTA TTTCTCAATA TGGCGGCTAA TTTCATTCAT GAATTATTTG CTGGGGATGT GGGAGAGTTT TTAGCTTCTG GAACCTTAGT GGCTGGAGAA TTTGCCCCCC TCGTAACACA ATGGCTGAAG CAGATTTCTA CTTTAGAACA AATACTGATC AAATCTTTGG CTACAAAGGT GCAAGGATTC ACTCGCCAAG AGATACTACT ACACTTAGCA AGTCGCGCTG CCAATGGGGA TATTTTAGCA GCGCTCTTAT CTTTAAAGCG AAGAGGGTTG ATAGAAACGA TGAAAGATGG TGAATTAGAA CGCTTTTATT TACAGCCTGT CATTCTCAAG TGTGTGCAGC GTTTATTTTA A
|
Protein sequence | MPSLKLSLTG LQIIKQARSE KGWTIDNPCW LEQASQVLEP GRNWENAEVF AAGVSLATWK RFLKGDAIDA SVFKAFCQVL GLNWQDLVER PPNSFIIGTT QIPNIPLFFG RRYELTTLSQ AIEQGTRLIA ITGIGGMGKT ALATKLVESR SSHFSQTLWF SFHHNPPAKD KIPTLVPQTL MVFDGWDGIL GGNRGGQYRP EYEPYADFLR TVVQTTHTSC VIITSREQPE GLNILGAGGA VIFPLGGLME GAIELLQHHQ LTFNAQQWIT LVNQYGGNPL FLNMAANFIH ELFAGDVGEF LASGTLVAGE FAPLVTQWLK QISTLEQILI KSLATKVQGF TRQEILLHLA SRAANGDILA ALLSLKRRGL IETMKDGELE RFYLQPVILK CVQRLF
|
| |