Gene Ava_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2788 
Symbol 
ID3681721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3441135 
End bp3442325 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content43% 
IMG OID637718134 
Producthypothetical protein 
Protein accessionYP_323296 
Protein GI75909000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0640991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAGCC TCAAACTCTC GCTGACTGGA TTGCAAATCA TCAAACAAGC TCGAAGCGAA 
AAAGGTTGGA CAATTGATAA TCCATGTTGG TTAGAACAAG CAAGTCAAGT GCTTGAGCCT
GGGCGTAACT GGGAAAATGC GGAGGTTTTT GCAGCCGGGG TATCTTTAGC CACCTGGAAA
CGCTTCCTCA AAGGTGATGC GATCGATGCG TCGGTATTTA AAGCCTTTTG TCAGGTTTTG
GGATTGAATT GGCAAGACTT AGTGGAACGT CCCCCTAACT CATTCATCAT TGGGACAACC
CAAATCCCCA ATATTCCCTT ATTTTTTGGA CGACGTTATG AACTGACAAC ACTCAGCCAA
GCAATTGAAC AAGGAACACG CCTAATTGCT ATTACAGGGA TTGGGGGTAT GGGGAAAACG
GCTTTAGCCA CAAAGTTAGT AGAAAGCAGG TCATCTCATT TTTCTCAAAC CCTATGGTTT
TCGTTTCACC ACAACCCACC TGCCAAGGAT AAAATACCAA CTTTAGTACC ACAAACCCTG
ATGGTTTTTG ATGGTTGGGA TGGCATTTTG GGGGGTAATC GAGGGGGACA ATATCGCCCA
GAATATGAAC CATACGCAGA TTTTCTCCGC ACAGTGGTAC AAACTACTCA TACTAGTTGT
GTAATTATCA CTAGCCGAGA ACAACCAGAA GGGTTAAATA TTTTAGGCGC TGGGGGTGCA
GTGATTTTCC CCCTTGGTGG ACTAATGGAA GGTGCTATTG AGCTTTTGCA GCATCATCAA
CTGACTTTTA ATGCTCAACA GTGGATTACG CTAGTCAATC AATATGGTGG TAATCCCTTA
TTTCTCAATA TGGCGGCTAA TTTCATTCAT GAATTATTTG CTGGGGATGT GGGAGAGTTT
TTAGCTTCTG GAACCTTAGT GGCTGGAGAA TTTGCCCCCC TCGTAACACA ATGGCTGAAG
CAGATTTCTA CTTTAGAACA AATACTGATC AAATCTTTGG CTACAAAGGT GCAAGGATTC
ACTCGCCAAG AGATACTACT ACACTTAGCA AGTCGCGCTG CCAATGGGGA TATTTTAGCA
GCGCTCTTAT CTTTAAAGCG AAGAGGGTTG ATAGAAACGA TGAAAGATGG TGAATTAGAA
CGCTTTTATT TACAGCCTGT CATTCTCAAG TGTGTGCAGC GTTTATTTTA A
 
Protein sequence
MPSLKLSLTG LQIIKQARSE KGWTIDNPCW LEQASQVLEP GRNWENAEVF AAGVSLATWK 
RFLKGDAIDA SVFKAFCQVL GLNWQDLVER PPNSFIIGTT QIPNIPLFFG RRYELTTLSQ
AIEQGTRLIA ITGIGGMGKT ALATKLVESR SSHFSQTLWF SFHHNPPAKD KIPTLVPQTL
MVFDGWDGIL GGNRGGQYRP EYEPYADFLR TVVQTTHTSC VIITSREQPE GLNILGAGGA
VIFPLGGLME GAIELLQHHQ LTFNAQQWIT LVNQYGGNPL FLNMAANFIH ELFAGDVGEF
LASGTLVAGE FAPLVTQWLK QISTLEQILI KSLATKVQGF TRQEILLHLA SRAANGDILA
ALLSLKRRGL IETMKDGELE RFYLQPVILK CVQRLF