Gene Ava_2776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2776 
Symbol 
ID3681709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3429540 
End bp3430100 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content41% 
IMG OID637718122 
Productnuclease (SNase-like) 
Protein accessionYP_323284 
Protein GI75908988 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGT CAATTAAAAA AGCGCTGATA TTACTGAGTA CAGGGATAAT TTTGTTATGT 
TTGATGGGTT GCGATCGCTT GTTTAGTGCG AGTGGGGATT CAGTAGAAAG AGTCAGCGAT
GGTGATACAT TAGTTGTGAA AGATGCCCAA GGGAAGAAAG TTACTGTGCG GTTTGCTTGT
ATGGATGCGC CAGAAATTGC CCACTCTAAT AAAGAAAAGC AAAGTAAACG TGCTAGAGAT
CGCAATCAAT TTACTTGGGG TGTGAAAGCA CGAGAACGGG TACAGCAATT GGTGAAACAA
GGAGGCGATC GCGTTACCTT GAATATTACT GATAGCGATC GTTATGGACG TAAAGTTGCC
GAAGTCAGAT TAACAGATGG CACTTTTGTA CAGCAAGTAC TCATACAAGA AGGTTTAGCT
AAAGTGTATC GCCCTTATTT AAGCAAGTGT CCCAGCAAAG CGATCGTGCA GCAAGCCGAA
ACCAAAGCCC AACAACAACA AATAGGAATT TGGGGAGATC CTAAATTTGT CAATCCGTGG
GAATATCGAA GTTTAAAATA A
 
Protein sequence
MNKSIKKALI LLSTGIILLC LMGCDRLFSA SGDSVERVSD GDTLVVKDAQ GKKVTVRFAC 
MDAPEIAHSN KEKQSKRARD RNQFTWGVKA RERVQQLVKQ GGDRVTLNIT DSDRYGRKVA
EVRLTDGTFV QQVLIQEGLA KVYRPYLSKC PSKAIVQQAE TKAQQQQIGI WGDPKFVNPW
EYRSLK