Gene Ava_2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2713 
Symbol 
ID3682211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3349921 
End bp3351057 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content46% 
IMG OID637718058 
Productcitrate synthase 
Protein accessionYP_323221 
Protein GI75908925 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01800] 2-methylcitrate synthase/citrate synthase II 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.656469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTGT GCGAATATAA GCCTGGTTTA GAAGGCATTC CCGCCGCCCA ATCGAGTATC 
AGTTATGTAG ATGGGCAAAA GGGAATACTA GAATATCGTG GCATCCGGAT TGAGGATTTA
GCCCAGAAGA GTACTTTTCT GGAAACTGCT TATCTTTTAA TCTGGGGTGA GTTGCCAACA
AAAGAAGAAT TGCAAGTATT TGAGGAGGAA GTCCGTCTTC ATCGGCGGAT TAAATACCGG
ATTCGGGATA TGATGAAGTG CTTTCCCGAA TCGGGTCATC CAATGGATGC ACTCCAAGCC
TCTGCTGCGG CTTTAGGCTT GTTTTACTCC CGTCGAGATT TGCACAATCC TGTCTATATT
CGGGATGCTG TAGTGCGCTT AATAGCTACT ATTCCAACGA TGGTAGCTGC ATTCCAGTTG
ATGCGGAAAG GCAATGACCC CGTTAAACCC CGCGATGATT TAGATTATTC CGCCAATTTT
CTCTACATGC TCAACGAGAA AGAACCGGAT GCTTTGGCGG CAAAAATCTT TGATATCTGC
TTGATTCTCC ATGTCGAGCA TACGATGAAT GCTTCTACCT TCAGTGCTAG GGTAACAGCT
TCAACCTTGA CAGACCCCTA TGCGGTGGTT GCTAGCGCTG TGGGAACCTT GGGAGGGCCT
TTACACGGTG GAGCCAATGA AGAAGTAATT CAGATGTTGG AAGAAATCGG TTCCGTGGAG
AATGTGCGTT CTTATGTCGA AGAGAGGTTG CAACGGAAAG ACAAGCTCAT GGGCTTTGGA
CATCGTGTTT ACAAGGTGAA AGACCCACGG GCAACAATTT TGCAAGGTCT CGCAGAACAG
TTGTTTGCCA AGTTCGGCGC GGATAAGTAT TACGACATCG CCCAAGAAAT GGAACGGGTA
GTCGAAGAGA AGCTTGGTCA TAAAGGGATT TATCCCAATG TTGACTTTTA CTCAGGTCTA
GTGTATAGGA AGATGGGTAT TCCTACAGAC TTGTTTACAC CAATCTTTGC GATCGCTCGT
GTGGCTGGTT GGTTAGCCCA CTGGAAAGAA CAACTTGAAG AAAACCGCAT CTTCCGTCCT
ACCCAGGTTT ATAACGGCAA ACACAGTGTT ACTTACACCC CCATTGACCA ACGTTAA
 
Protein sequence
MMVCEYKPGL EGIPAAQSSI SYVDGQKGIL EYRGIRIEDL AQKSTFLETA YLLIWGELPT 
KEELQVFEEE VRLHRRIKYR IRDMMKCFPE SGHPMDALQA SAAALGLFYS RRDLHNPVYI
RDAVVRLIAT IPTMVAAFQL MRKGNDPVKP RDDLDYSANF LYMLNEKEPD ALAAKIFDIC
LILHVEHTMN ASTFSARVTA STLTDPYAVV ASAVGTLGGP LHGGANEEVI QMLEEIGSVE
NVRSYVEERL QRKDKLMGFG HRVYKVKDPR ATILQGLAEQ LFAKFGADKY YDIAQEMERV
VEEKLGHKGI YPNVDFYSGL VYRKMGIPTD LFTPIFAIAR VAGWLAHWKE QLEENRIFRP
TQVYNGKHSV TYTPIDQR