Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2704 |
Symbol | |
ID | 3682202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3341484 |
End bp | 3342413 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637718049 |
Product | farnesyl-diphosphate synthase |
Protein accession | YP_323212 |
Protein GI | 75908916 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000153186 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.671867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGCAG CTGATAACCT CCAGAAGATG TCAGAGGAAG CCAAATTTAA TCTAGTAGCT TATCTTAAAG AGCGGCAAAA ACTTTGTGAA GCGGCTTTGG ATGAAGCCAT ACCTGTTATT TATCCAGAAA AAATTTATGA ATCGATGCGC TACTCCTTAT TAGCTGGAGG TAAGCGCTTG CGTCCGATTC TTTGTCTGGC TACTTCGGAA ATGATGGGTG GAACAATCGA AATAGCTATG CCAACAGCTT GCGCTGTGGA AATGATCCAC ACCATGTCTT TGATTCACGA CGACTTGCCA GCAATGGATA ACGACGATTA CCGTCGCGGT ATGCTGACGA ATCACAAGGT ATATGGTGAT GATATTGCGA TTTTGGCGGG AGATGGCTTA TTAGCCTATG CTTTCGAGTT CGTAGCTATC CGTACTCCTG AAAGCGTGCC TAGAGACCGA GTATTGCAGG TAGTAGCCCG ATTGGGACGA GCATTAGGAG CTGCTGGCTT GGTTGGGGGT CAAGTAGTTG ACTTAGACTC AGAAGGGAAA TCAGATATTT CCTTAGAAAC GCTCAATTTT ATTCATAATC ACAAAACAGC AGCTCTTTTA GAAGCTTGTG TGGTCTGTGG CGGCATTTTA GCTGGGGCAT CATCAGAAGA TGTACAAAGA CTTTCACGGT ATTCTCAAAA TATTGGGCTA GCATTTCAAA TCATCGATGA TATTCTTGAT ATCACTTCTA CTCAAGAGCA ATTAGGCAAG ACTGCGGGTA AAGACCTTTT AGCGAAGAAA GTCACCTATC CTAGCCTATG GGGAATTGAA CAATCACGGG TCAAAGCCCA ACAGCTAATT GAAGCAGCTT GTGCAGAACT AGAACCATTT GGAGAAGATG CACAGCCTCT GAAAGCGATC GCTCACTTCA TCACTAGCCG TAATCACTAA
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Protein sequence | MVAADNLQKM SEEAKFNLVA YLKERQKLCE AALDEAIPVI YPEKIYESMR YSLLAGGKRL RPILCLATSE MMGGTIEIAM PTACAVEMIH TMSLIHDDLP AMDNDDYRRG MLTNHKVYGD DIAILAGDGL LAYAFEFVAI RTPESVPRDR VLQVVARLGR ALGAAGLVGG QVVDLDSEGK SDISLETLNF IHNHKTAALL EACVVCGGIL AGASSEDVQR LSRYSQNIGL AFQIIDDILD ITSTQEQLGK TAGKDLLAKK VTYPSLWGIE QSRVKAQQLI EAACAELEPF GEDAQPLKAI AHFITSRNH
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