Gene Ava_2693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2693 
Symbol 
ID3682054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3329576 
End bp3330235 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content42% 
IMG OID637718038 
Producttranslation factor SUA5 
Protein accessionYP_323201 
Protein GI75908905 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.883146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA TTATCGCTGT CCATCCTGAT AATCCCCAGA GTCGCAGAAT AGAGGAAATA 
AGGTCAGCGC TTTCCAGTGG CGCGGTGATG CTTTATCCAA CTGACACAGT TTATGCGATC
GGTTGTGATT TAAATGTCAA GTCTGCGGTG GAAAGAGTGC GGCAAATCAA GCAGTTAGCA
AACGATAAAC CACTGACATT TTTATGTCCT TCACTGTCTA ATGTAGCTAC TTATGCCTTT
GTCAGTGATA CAGCTTATCG AATTATGAAG CGACTAATAC CAGGAACTTA CACATTTTTG
TTACCTGCAA CTAAGTTGGT ACCAAAATTA GTCCAAAGTC CCAAGCGTAA AACTACTGGA
ATTCGCGTAC CAAATCATAC TGTATGTTTA GCATTACTTG AAGCCTTGGG GAATCCGATT
ATTTCCACTT CAGCACACAT ACCGCCAGAT GAGGCAGGTA ATGGGAAAGT CGGGATAGTT
TCAGAATCGA TTACCTCAAT GGCAGAGCTA TTTGACCGCG TGGATAAATT AGTTGATGTG
ATTGTAGACA CTGGACAGGA ACCAACTTAC GATGTGTCCA CAATCGTTGA TTTGACGGGA
GATGAACCAA TGATTACTAG ACAAGGATTA GGTTGGGAAG CGGTAAAAGC GTGGGTATAA
 
Protein sequence
MAKIIAVHPD NPQSRRIEEI RSALSSGAVM LYPTDTVYAI GCDLNVKSAV ERVRQIKQLA 
NDKPLTFLCP SLSNVATYAF VSDTAYRIMK RLIPGTYTFL LPATKLVPKL VQSPKRKTTG
IRVPNHTVCL ALLEALGNPI ISTSAHIPPD EAGNGKVGIV SESITSMAEL FDRVDKLVDV
IVDTGQEPTY DVSTIVDLTG DEPMITRQGL GWEAVKAWV