| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2544 |
|---|
| Symbol | |
|---|
| ID | 3682429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 3144922 |
|---|
| End bp | 3148185 |
|---|
| Gene Length | 3264 bp |
|---|
| Protein Length | 1087 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637717889 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_323054 |
|---|
| Protein GI | 75908758 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0694393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAAG TAAATAAAAG TGGCGGATTT AGTATTAGTA CCGTATCAAT TCGCCAACAT
ATCGGTACAC TCATGCTCAC CTTAGCAGTT ATGGTGCTGG GTGTATTTTT CATTATCAAT
TTGCCCGTAG ATTTATTACC CTCAATTACC TATCCCCGCA TTGGTGTACG CATAGAAGCA
CCTGGAGTTT CCCCGGAGGT AGCAATTGAT GAAGTGACTA GACCTTTGGA AGAAGCCTTC
TCGGCAACAG AAGGTGTGGT ACAGATTTTT TCTCAAACTC GTGAGGGACA AGTCAGTTTG
GATTTGTTCT TTCAACCAGG AGGTAATATT GACCAAGCTC TCAATGATGC TACTGCGGCT
TTCAACAGAG CGAGAAACGG CTTACCAGAC ACAATTGAAG AACCGCGTCT GTTCAAAATC
GATCCTTCCC AGTTACCAGT ATATGAATTC GCCTTAACAT CCCCCTCCTT AGAAGGGCTA
GATTTACGAG TGTTTGCAGA AGAAGAACTA GCCCGCGAAT TGGGTGTTGT TCCTGGAGTA
GCTGGGGTAG ACGTATCGGG CGGAGTGCAA GAAGAAGTTA GAGTTAATAT TGATTTAGAC
CGCTTGCAAG CTTTGGGTGT AGGTTTAAAT GATGTTCTAG ATGAACTCAG AAACCGCAAC
GTTGATATTT CTGGTGGTCG GATTTTAGGA CAAAATTCCG AACCTTTAAC CCGTACTGTT
GGACGCTTTC AAAGTGCCGA CGAACTCAGA AATTTGTCCT TTGAGGTCTC CTCAACAGCT
TCCTCAAATC CCAGTCAACA GTCAACAGTC AACAGTCAAC CATCAACCAT TAACAACCGC
CGCGTTTATC TCCGGGACTT TGCCCAAATT ATAGATGGTT CAGAACAACA ACGGATATAT
GTCTCACTCA ACGGTGAGCC GGCAGTCAAA GTCAGTGTTC AAAAGCAACC AGATGCTAAC
ACTATTAATG TTGTTGATGC TGTAAAAAAA CGTTTAGAAG AACTGCGACA ATCTAGCGTA
GTTCCTGAAG GTACCGTGAT TACACCTACC TTAGATGAAT CGAGATTTAT CCGTAACTCT
ATCTCCAATG TTACCAGTTC TGGATTGATA GGAACAGCAT TAGCGGCGAT CGCTGTCCTT
CTCTTCCTTG GTTCCTTACG ACAGACCTTT ATTATCGTTA TCGCCATCCC TCTAGCCACC
CTAGCCGCCA TCATCTTGAT GGGGTTATTC GGCTTATCCA TCAACGTCTT TAGTTTAGGT
GGTTTAGCCT TGGGCGTGGG TATAGTCGTA GACAACTCCA TCGTCATGTT GGAGAGCATT
GCCGAAGGCG TGGGCATGAC TCCTGGTAAG GATAGTAAAA GCAGACTCAG TCACAAGCAA
CTAATTGCTC AAGCAGAAAC CAGCAGCCAA GAAGTCGAAT CGGCTCTAGT TGCTTCTACG
AGTACAAACT TAGTGGCAGT GTTGCCGTTT TTACTTATTG GTGGATTTAT AGCCTTATTA
TTTAACGAAC TAATTCTCAC CATCACCTTT TCTGTTGCCG CTTCTATCGT CATTGCTGTA
ACAGTTGTGC CAATGCTTGC TTCTCGTTTA TTAGGCTGGA AATTTTCCAG TGGCTTGAGC
AACTTTTGGC CATTACGAAA ATTCAATGAG CGTTTTGAAG CAGCTACGAG AGGATATGGT
AGATTTTTAG CTGGCATCTT ACGCTGGCGA TTAGTCACAG TAGCGATCGC CATTCTCCTG
TTTGGTGGTG GTAGTTTATG GATGGCTCCC CAAATTCCCC AACAAATCCT CCCCCGTATT
AGTACAGGAC AAGCCAGCTT ATTCGCTCAG TTCCCACCCG GCACGCCCTT AGAGACTAAT
AGCAAAGTCA TGAGCGCGGT GGATGAAATC ATTCGGCAAC AGCCAGAAAC AGAATATACT
TTCACGACTG CCGGTGGTGC TTTATTTGGC ACTAATACCA ATGCTAACCC CTTACGAGGT
ACCAGCACCA TCACCCTCAA ACCAGGCACT AATGTAGATA CTTATGTCGA ACGAGTTACC
CAAGAATTAA ATAAACTAAA TTTAGCAGGT ATTCGTTTAC GCTTGGCTCC TGGTCAAGTA
CGGGGTTTAA TTACCAATAA CTCTCCTGTA CGCAATGCCG ACGTTGATGT GATTCTCCAG
GGTACTAATG CAGACACATT ACAACAAGCC AGCCGTCAGG TACTAGCAGC CTTAGAAGAA
CAAGCCACCC AAGTGAGATT TCGTCCCGAT GCTGATGAAC GACAACCAGA AATTCAAATC
TTGCCCGACT GGGAAAGAGT TTCTGCATTA GGACTAACTA CTAGAGATAT CGGAGACACA
ATTCAGACCG CCCTAGAAGG CAGCGTACCC ACACAACTGC AACGCGGCAA CCGCTTGGTA
GATGTGCGAG TACAGTTAAA TGAGTCAGCA GTACAAACAG GTTCCCAACT ACAAAGACTA
CCTTTATTTG TTGGCAACAA TCGGCAAGTT CGCCTCAGTG ATGTCGCCAA AATTGTCGAA
GCCCAAGCAC CGGGAGAGAT TCAGCGTATT AACCAACGCC AAGTTATCAT ATTTGCCGGA
AATTTAACTG AAGGAGCTAG TTTAAGTCGC GCCATCGAAC AGGTAAATAA CGTCATTAGT
AACCTAGAAT TACCGGAAGG CGTAAGTGTT TTACCAAGCG CCGCCGCAGA ATCCAATCGG
CAACTACAAA GTTCACTGCA ACTATTAGGC GGATTAGCTA GCTTTCTCGT TTTCGTCGTC
ATGGCAGTGC AGTACAATTC CCTCATTGAC CCGCTAGTAA TTATGTTTAC CATTCCCCTA
GCACTAGCAG GCGGGATTTT CGGACTTTAC ATTACCAATA CTGCCATTGG TGCAACCGTC
ATCGTCGGTG CAGTTCTATT AGTGGGAATT GTCGTCAATA ATGCCATCAT CATGGTGGAA
TTGGCAAATC AAATCCGCGA TCGCGACAAA GTTGATCGCC GCACTGCCAT TTTGCAAGCT
GCACCCCAAC GCTTACGTCC CATATTAATG ACCACCATTA CTACTGTTTT AGGGATGTTT
CCCCTAGCAT TAGGAATCGG TGAAGGCTCA GAATTTCTCC AACCATTGGG TGTAGTAGTG
TTTTCCGGTT TATCCTTAGC AACATTACTC ACACTATTCA TCATCCCCTG CTTTTACACC
CTACTCCATG ATTTATTGAG TGGAGCTTGG AGTAAGCCAG TATTTATTTG GTGGCGGGTT
TGGAGGAAAA GGTTCACTTT GTAA
|
|---|
| Protein sequence | MQQVNKSGGF SISTVSIRQH IGTLMLTLAV MVLGVFFIIN LPVDLLPSIT YPRIGVRIEA
PGVSPEVAID EVTRPLEEAF SATEGVVQIF SQTREGQVSL DLFFQPGGNI DQALNDATAA
FNRARNGLPD TIEEPRLFKI DPSQLPVYEF ALTSPSLEGL DLRVFAEEEL ARELGVVPGV
AGVDVSGGVQ EEVRVNIDLD RLQALGVGLN DVLDELRNRN VDISGGRILG QNSEPLTRTV
GRFQSADELR NLSFEVSSTA SSNPSQQSTV NSQPSTINNR RVYLRDFAQI IDGSEQQRIY
VSLNGEPAVK VSVQKQPDAN TINVVDAVKK RLEELRQSSV VPEGTVITPT LDESRFIRNS
ISNVTSSGLI GTALAAIAVL LFLGSLRQTF IIVIAIPLAT LAAIILMGLF GLSINVFSLG
GLALGVGIVV DNSIVMLESI AEGVGMTPGK DSKSRLSHKQ LIAQAETSSQ EVESALVAST
STNLVAVLPF LLIGGFIALL FNELILTITF SVAASIVIAV TVVPMLASRL LGWKFSSGLS
NFWPLRKFNE RFEAATRGYG RFLAGILRWR LVTVAIAILL FGGGSLWMAP QIPQQILPRI
STGQASLFAQ FPPGTPLETN SKVMSAVDEI IRQQPETEYT FTTAGGALFG TNTNANPLRG
TSTITLKPGT NVDTYVERVT QELNKLNLAG IRLRLAPGQV RGLITNNSPV RNADVDVILQ
GTNADTLQQA SRQVLAALEE QATQVRFRPD ADERQPEIQI LPDWERVSAL GLTTRDIGDT
IQTALEGSVP TQLQRGNRLV DVRVQLNESA VQTGSQLQRL PLFVGNNRQV RLSDVAKIVE
AQAPGEIQRI NQRQVIIFAG NLTEGASLSR AIEQVNNVIS NLELPEGVSV LPSAAAESNR
QLQSSLQLLG GLASFLVFVV MAVQYNSLID PLVIMFTIPL ALAGGIFGLY ITNTAIGATV
IVGAVLLVGI VVNNAIIMVE LANQIRDRDK VDRRTAILQA APQRLRPILM TTITTVLGMF
PLALGIGEGS EFLQPLGVVV FSGLSLATLL TLFIIPCFYT LLHDLLSGAW SKPVFIWWRV
WRKRFTL
|
|---|
| |