Gene Ava_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2540 
Symbol 
ID3682425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3139658 
End bp3139990 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content42% 
IMG OID637717885 
Productphotosystem I reaction center subunit X-like protein 
Protein accessionYP_323050 
Protein GI75908754 
COG category 
COG ID 
TIGRFAM ID[TIGR03049] photosystem I reaction center subunit PsaK 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGT TAACTAATCA GCTAAATCAA TTTATTCATG CAGGAGAAAG AACTATGCTC 
TCATCAATCC TCATAGCGGC TCAAGCCACC GTACCCAACA CAGGTACAAC CTGGAACTGG
AATGGCACAT TTATTATCAT CGCTAGTTGT CTATTAGTGC TTTTAATTGC CGGCAGGTCG
ATTCGCTATC CCCATGTAGG GACAAAGATG CCTTTGCCCT TCCCTTCAAT TTTCAATAAT
CCCAGCGTTG CCACATTTTT GGCATCTATG AGTTTTGGTC ACATTATTGG CGTTGCTGCC
GTGTTGGGAT TGACTAATCT TGGTGTTATT TAA
 
Protein sequence
MLLLTNQLNQ FIHAGERTML SSILIAAQAT VPNTGTTWNW NGTFIIIASC LLVLLIAGRS 
IRYPHVGTKM PLPFPSIFNN PSVATFLASM SFGHIIGVAA VLGLTNLGVI