Gene Ava_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2505 
Symbol 
ID3682758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3100152 
End bp3100595 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content39% 
IMG OID637717848 
ProductPilT protein-like 
Protein accessionYP_323015 
Protein GI75908719 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00228638 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.384652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTTA TTGATACTAA TCACTGTTCC TACCTAATGG AAGGCCTGCC TAGTGTAGCC 
GAACATTTGC GATCGCTTGG TCAAGTTCAA CTAGCAACCA GCGTGATAGT TGCTGGTGAG
CTAAGGTTTA TGGCGCACAA CTCCCATCAA AAGGCTGCTA ATTTAATTAA AATCAATGCG
TTCCTGCGCC GGATTAATTT ATACGGAATC GATAAAGAGA CTACAGAAAT TTACGGTGAT
TTTAAATCAG AAATTATCAA GCAATTTGGC CCAAAAGAAA AAAGTCAACG CAAAACAACT
AAATTAACTA GCATTGGTAT CAGTGAAAAC GACCTCTGGA TAGCCGCAAC CGCTTTACGC
CACTCATTAA TTATCGTGTC GTCTGATAGT GATTTTGTAA GAATGCGGCA AGTAAGAGAA
TTAGCTTTAG AAAACTGGGT TTAG
 
Protein sequence
MYLIDTNHCS YLMEGLPSVA EHLRSLGQVQ LATSVIVAGE LRFMAHNSHQ KAANLIKINA 
FLRRINLYGI DKETTEIYGD FKSEIIKQFG PKEKSQRKTT KLTSIGISEN DLWIAATALR
HSLIIVSSDS DFVRMRQVRE LALENWV