Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2505 |
Symbol | |
ID | 3682758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3100152 |
End bp | 3100595 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637717848 |
Product | PilT protein-like |
Protein accession | YP_323015 |
Protein GI | 75908719 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00228638 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.384652 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCTTA TTGATACTAA TCACTGTTCC TACCTAATGG AAGGCCTGCC TAGTGTAGCC GAACATTTGC GATCGCTTGG TCAAGTTCAA CTAGCAACCA GCGTGATAGT TGCTGGTGAG CTAAGGTTTA TGGCGCACAA CTCCCATCAA AAGGCTGCTA ATTTAATTAA AATCAATGCG TTCCTGCGCC GGATTAATTT ATACGGAATC GATAAAGAGA CTACAGAAAT TTACGGTGAT TTTAAATCAG AAATTATCAA GCAATTTGGC CCAAAAGAAA AAAGTCAACG CAAAACAACT AAATTAACTA GCATTGGTAT CAGTGAAAAC GACCTCTGGA TAGCCGCAAC CGCTTTACGC CACTCATTAA TTATCGTGTC GTCTGATAGT GATTTTGTAA GAATGCGGCA AGTAAGAGAA TTAGCTTTAG AAAACTGGGT TTAG
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Protein sequence | MYLIDTNHCS YLMEGLPSVA EHLRSLGQVQ LATSVIVAGE LRFMAHNSHQ KAANLIKINA FLRRINLYGI DKETTEIYGD FKSEIIKQFG PKEKSQRKTT KLTSIGISEN DLWIAATALR HSLIIVSSDS DFVRMRQVRE LALENWV
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