Gene Ava_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2479 
Symbol 
ID3682830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3075920 
End bp3076801 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content42% 
IMG OID637717822 
Productphosphate ABC transporter permease 
Protein accessionYP_322989 
Protein GI75908693 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.721455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTG ATTTTCCTGA AAGGAGTTTA ACTCGCGCCC CCATGTCTGG ACGGACGCTG 
TTTAATACGA TGATGACAGG AGTAGCATTC CTGTGTGGAG CATTAGCTCT GTTGCCGCTA
TTGGCAGTAC TATCTTATGT CATCATTAAA GGTTTTAGTA GTCTCAATCT AAGTATATTT
ACAGAATTGC CGCCCGCACC TCTAAGACAG GGAGGAGGTT TTGGTAATGC CATTTTGGGT
ACACTATTAA TGGTAGGAAT TGGTGCATTA ATTAGTATTC CATTAGGTGT AATAGCGGCA
ATTTATTTAA CAGAGTTTAG CTCTGGTAAA CTAGCCAGAT GGATTAGGTT TGCTACTAAT
GTCCTGAGCG GAGTTCCTTC TATTATTGCT GGTGTATTTG CTTATGGGAT TATAGTTCTG
ACATTGGTAA AGCTGAATTT AGGTTCTTAT TCAGCTATTG GCGGGGGATT TGCATTAGCA
ATCTTAATGC TGCCAATTAT TGTGAGAACT ACTGACGAAG CTTTACAGCT AGTTTCGCAA
GATTTGCGCC AAGCATCTGT AGGTTTGGGA GCTACTAATT TTCAAACAGT AACACAAGTT
GTCTTGCCAG CTGCTTTACC GGCAATTGTC ACAGGATCAA CATTGGCGAT CGCCCGTGCT
GCTGGAGAAA CTGCACCTTT ATTGTTTACT GCCTTATTTT CACCATTCTG GCCTAATAGC
TTATTTAAAC CCACAGCTTC GCTGGCTGTT TTGGTTTACA ACTTTGCCAT TTCTCCGTTT
AAAAATTGGC AGTCACTAGC CTGGGCTGCA TCTTTGATTT TGGTGTTGAT GGTTCTCATC
ACCAGTATCA TTGCTCGCTG GGCAACTCGT CAAAAAGCTT AG
 
Protein sequence
MNADFPERSL TRAPMSGRTL FNTMMTGVAF LCGALALLPL LAVLSYVIIK GFSSLNLSIF 
TELPPAPLRQ GGGFGNAILG TLLMVGIGAL ISIPLGVIAA IYLTEFSSGK LARWIRFATN
VLSGVPSIIA GVFAYGIIVL TLVKLNLGSY SAIGGGFALA ILMLPIIVRT TDEALQLVSQ
DLRQASVGLG ATNFQTVTQV VLPAALPAIV TGSTLAIARA AGETAPLLFT ALFSPFWPNS
LFKPTASLAV LVYNFAISPF KNWQSLAWAA SLILVLMVLI TSIIARWATR QKA