Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2392 |
Symbol | |
ID | 3683191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2972576 |
End bp | 2973862 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637717738 |
Product | putative carbamoylphosphate synthase large subunit short form |
Protein accession | YP_322905 |
Protein GI | 75908609 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000165669 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000484341 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAT ATAAAGTCTT AATATTTCCA GGAGGATCGG AAATTGCTTT AGAAATTCAT AGAGCATTAT GTGACTGCAA AGATATTCAG CTATATTCGG CTGGTCTAGA TGTTGCAAAT CACGCCCCAT ATGTTTTTGC AGAACATTTT AATATTCCTA GCATTCATGA GCCTGGATGG ATAGATGCTT TAAATCAGGT AATTGATGCT AATAGCATAG ATTATATATT TCCAGCTTAT GACGATATAA TTGTTGCTTT AGCAGAAAAA TCTCAATACA TTAAGGCTAA AATAGTTACT TCTCCTTTAG AAACCTGTTT AATTACTAGA TTTAAATCTA AAACATATAA AGTATTATTT GGAACTATAC CAGTTCCTGA GATATATCAT AGTTTACATG AAATAAAACA ATTCCCTGTA TTTGTTAAAC CAGATAAAGG TCAAGCTTCT CAAGATACAC ATATTATCTA TAATCCCCAA GATGTTTCTT TCTTTTTATC TAAAATAAAT AAATATATTA TTACCGAATA TCTCCCTGGC GAAGAATACA CAATTGATTG CTTTTCTCAT CGTGACTTAG GATTATTATT TTGTAGTGGG AGAAAAAGAA TTAGAACAAA ATGTGGTATT TCAATGAGTG TTTCTAGTGA AAACATAGAT CAAGAATTAT TTATTAGATA TGCTGAACTA ATTACACAAA AGTTAAATTT TTATGGTGTT TGGTTTTTTC AATTAAAGCA AGATAAATGT GGCGAATATA AACTTTTAGA GATTGCCCCT CGCGTAGCAG GTGCGATGGC ATTTCATAGA GTACAAGGAA TAAATTTCCC TCTTTTAAGT ATATATGAGC AAGAAAGAGT TCCAATTGAA ATTATTAATA ATAAATTTGA CTTAACGATG GATCGTGCTT TAATAAATCG GTACACACAT AATGTAGATT ATCAAACAGT GTATGTGGAT TTAGATGACA CTTTGGTTGG TAATAATAAA GTTAATTTGA ATTTGATAAA GCTTTTATAT CAGTGCATAA ATAATACAAA AAAAATAGTC TTATTAACGA AGCATTCAGG AGATATATAT GATTTTCTTA AAAAGTATAG AATTCAAAAT ATTTTTGACA ATATTATTCA GATAAATAAA GTAGAAGATA AAGCAAAATA TATAGTTGAA AGTCCTGCAA TATTTATTGA TGACAGTTTT CGAGAACGCA AGTCTATAAG CTTAAAACTA GGTATTCCTA CGTTTGATCT TAGTATGATA GAAATGCTCT TAGATGATAG GAAATAA
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Protein sequence | MKKYKVLIFP GGSEIALEIH RALCDCKDIQ LYSAGLDVAN HAPYVFAEHF NIPSIHEPGW IDALNQVIDA NSIDYIFPAY DDIIVALAEK SQYIKAKIVT SPLETCLITR FKSKTYKVLF GTIPVPEIYH SLHEIKQFPV FVKPDKGQAS QDTHIIYNPQ DVSFFLSKIN KYIITEYLPG EEYTIDCFSH RDLGLLFCSG RKRIRTKCGI SMSVSSENID QELFIRYAEL ITQKLNFYGV WFFQLKQDKC GEYKLLEIAP RVAGAMAFHR VQGINFPLLS IYEQERVPIE IINNKFDLTM DRALINRYTH NVDYQTVYVD LDDTLVGNNK VNLNLIKLLY QCINNTKKIV LLTKHSGDIY DFLKKYRIQN IFDNIIQINK VEDKAKYIVE SPAIFIDDSF RERKSISLKL GIPTFDLSMI EMLLDDRK
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