Gene Ava_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2392 
Symbol 
ID3683191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2972576 
End bp2973862 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content29% 
IMG OID637717738 
Productputative carbamoylphosphate synthase large subunit short form 
Protein accessionYP_322905 
Protein GI75908609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000165669 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000484341 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAT ATAAAGTCTT AATATTTCCA GGAGGATCGG AAATTGCTTT AGAAATTCAT 
AGAGCATTAT GTGACTGCAA AGATATTCAG CTATATTCGG CTGGTCTAGA TGTTGCAAAT
CACGCCCCAT ATGTTTTTGC AGAACATTTT AATATTCCTA GCATTCATGA GCCTGGATGG
ATAGATGCTT TAAATCAGGT AATTGATGCT AATAGCATAG ATTATATATT TCCAGCTTAT
GACGATATAA TTGTTGCTTT AGCAGAAAAA TCTCAATACA TTAAGGCTAA AATAGTTACT
TCTCCTTTAG AAACCTGTTT AATTACTAGA TTTAAATCTA AAACATATAA AGTATTATTT
GGAACTATAC CAGTTCCTGA GATATATCAT AGTTTACATG AAATAAAACA ATTCCCTGTA
TTTGTTAAAC CAGATAAAGG TCAAGCTTCT CAAGATACAC ATATTATCTA TAATCCCCAA
GATGTTTCTT TCTTTTTATC TAAAATAAAT AAATATATTA TTACCGAATA TCTCCCTGGC
GAAGAATACA CAATTGATTG CTTTTCTCAT CGTGACTTAG GATTATTATT TTGTAGTGGG
AGAAAAAGAA TTAGAACAAA ATGTGGTATT TCAATGAGTG TTTCTAGTGA AAACATAGAT
CAAGAATTAT TTATTAGATA TGCTGAACTA ATTACACAAA AGTTAAATTT TTATGGTGTT
TGGTTTTTTC AATTAAAGCA AGATAAATGT GGCGAATATA AACTTTTAGA GATTGCCCCT
CGCGTAGCAG GTGCGATGGC ATTTCATAGA GTACAAGGAA TAAATTTCCC TCTTTTAAGT
ATATATGAGC AAGAAAGAGT TCCAATTGAA ATTATTAATA ATAAATTTGA CTTAACGATG
GATCGTGCTT TAATAAATCG GTACACACAT AATGTAGATT ATCAAACAGT GTATGTGGAT
TTAGATGACA CTTTGGTTGG TAATAATAAA GTTAATTTGA ATTTGATAAA GCTTTTATAT
CAGTGCATAA ATAATACAAA AAAAATAGTC TTATTAACGA AGCATTCAGG AGATATATAT
GATTTTCTTA AAAAGTATAG AATTCAAAAT ATTTTTGACA ATATTATTCA GATAAATAAA
GTAGAAGATA AAGCAAAATA TATAGTTGAA AGTCCTGCAA TATTTATTGA TGACAGTTTT
CGAGAACGCA AGTCTATAAG CTTAAAACTA GGTATTCCTA CGTTTGATCT TAGTATGATA
GAAATGCTCT TAGATGATAG GAAATAA
 
Protein sequence
MKKYKVLIFP GGSEIALEIH RALCDCKDIQ LYSAGLDVAN HAPYVFAEHF NIPSIHEPGW 
IDALNQVIDA NSIDYIFPAY DDIIVALAEK SQYIKAKIVT SPLETCLITR FKSKTYKVLF
GTIPVPEIYH SLHEIKQFPV FVKPDKGQAS QDTHIIYNPQ DVSFFLSKIN KYIITEYLPG
EEYTIDCFSH RDLGLLFCSG RKRIRTKCGI SMSVSSENID QELFIRYAEL ITQKLNFYGV
WFFQLKQDKC GEYKLLEIAP RVAGAMAFHR VQGINFPLLS IYEQERVPIE IINNKFDLTM
DRALINRYTH NVDYQTVYVD LDDTLVGNNK VNLNLIKLLY QCINNTKKIV LLTKHSGDIY
DFLKKYRIQN IFDNIIQINK VEDKAKYIVE SPAIFIDDSF RERKSISLKL GIPTFDLSMI
EMLLDDRK