Gene Ava_2299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2299 
Symbol 
ID3678907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2857497 
End bp2858309 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content43% 
IMG OID637717644 
Producthypothetical protein 
Protein accessionYP_322812 
Protein GI75908516 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCA AAAAGACTTC ATTATTTTTC AGAGCAACCT TCACAACAGT AGCTGGTACC 
TTGTCGGCTC TGGCTATGTC CACAAGCGCC TATGCTGCTA CTCTTGTTGA TTTAGAACTA
TCTCTACTAG TTGATGTATC TGGTAGTGTT GACAGTACAG AATTTCAGCT ACAAAGAGAC
GGCTATGTAA ATGCTTTTAG CAATCCTAAT CTATTCAACA ACTTCATCTC TAAAGGGAAT
ATTGGCAAGA TTGCTGTTAA CTACATCTAC TGGAGTAGCA CAAACCAGCA GCAACAAACC
GTAGGTTGGA CTTTAATTGA TAGTGTAGCA GCAGCACAGA ATTTTGCTGC GGCGATCAGT
GCAGCTCCAC GTCCCTTTAG TGGTAACACT GGTATCGGTT CTGCAATTAA TTTTGCTACA
CCCCTCTTCT TCAATAACGA CTTTGAAGGC GTACGCAAAG TTATTGACGT GTCTGGTGAT
GGCTCTACAA ATATAGGTGC TAATACAGCA GCTGCCCGCG ATGCTGCTTT AGCAGCTGGT
GTTGATGCCA TCAATGGTCT AGTCATTGGT AACAGCACAT CTCTGTTCAA CTTCTATAAC
AATAACGTCA AGGGCGGTAC TGGTTCTTTT GTTTTACAGG CTAATACTTT CCAAGATTTT
GCTGACACAG TTGAACGGAA ACTCAGAAGA GAAATTGTGA CAAATCCTCA GGGAACACCC
GAACCAGCTA CTCTGATTGG TTTATTCGGT CTGGGTGCGT TCGGTATCAC CTCAAATCTC
AAGCGTAATC GAAAGCAGCC AGTTAAGTGC TAA
 
Protein sequence
MNLKKTSLFF RATFTTVAGT LSALAMSTSA YAATLVDLEL SLLVDVSGSV DSTEFQLQRD 
GYVNAFSNPN LFNNFISKGN IGKIAVNYIY WSSTNQQQQT VGWTLIDSVA AAQNFAAAIS
AAPRPFSGNT GIGSAINFAT PLFFNNDFEG VRKVIDVSGD GSTNIGANTA AARDAALAAG
VDAINGLVIG NSTSLFNFYN NNVKGGTGSF VLQANTFQDF ADTVERKLRR EIVTNPQGTP
EPATLIGLFG LGAFGITSNL KRNRKQPVKC