Gene Ava_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2125 
Symbol 
ID3680266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2626632 
End bp2629160 
Gene Length2529 bp 
Protein Length842 aa 
Translation table11 
GC content33% 
IMG OID637717468 
ProductType III restriction enzyme, res subunit 
Protein accessionYP_322640 
Protein GI75908344 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTATG TATCACTTGA TCTTGAGCAA CTCAGAGAAC AAGATACGAA CTTTGTGCCT 
AAATCTCCTT TTCAGCACCA AATTGAGGCA TTTGAAAAAC TTAGTAATAC TTTTCGGCTT
GACAATAAAA AACCAGGCAG TGGAATATTA GTGCTGCCTA CAGGTGCAGG TAAAACATTT
ACGGCTGTAA GGTGGTTGTG TGATCATGTA GTTCCTAAAA ATATTAAAAT CCTTTGGTTA
GCTCCTTCAT ATTATTTATT GGATCAAGCA TTCTCTACTT TTAAAGAAAA TGCACGAGGA
ATTTCATATT CTAAAAAAAT ATTAAATATT AGATGTGTTT CCAGCAATCC TTCTCATGCT
AAAGCAGCAT CTATAAAATC AACCGATGAT ATTATCATCA TGACAGTACA AACAGCTATC
AGTAATTTAA GCCCTAATGC TTTAGATGGT TCAGGTAATA AGGTGAAAAC ACCTTTTAGA
AAATTTATTG AAAATTGCAA AGAAACAGGT TTGTTTATAA TAGTGGATGA AGCTCACCAT
TCACCTGCCT ATGGTTGCAG AAATTTATTA ATTGGTGAGA TAGGACTTAG ATCAATAGTA
CCCAATTCAA ATATACTTGG TCTAACAGCC ACACCAACTT ATACAGATAA GACTAGAAGA
GGTTGGTTAT GGAAAATATA TAAGGATGGA GTTAACGGAG TTATCTATCA AGCAGATAAA
GAAGCCCTAA TAGCACAAGA TATTCTAGCT AGACCTAATT ATATTGAAGT ATCGACTGGT
ACAGAAATGG TAGTCGATGA TAGATTATAT GAAAAATTAG TTAAACAACA CAAAGACCTT
CCTGAATCAA TCATAGAAAC TCTTGCAAAC GATAAACATA GAAATAATCT TATAGTAAAA
ACTTATACAT CAAATAAAGA TATTTATGGT AAAACTATTA TCTTTGCTGA CCGTTGGTTT
CAATGTGTTT ATATAAAAGA TAAACTTCTT GAAAAAGGTA TTAAAGCAGA TGCTATTTAT
TCCCATATAG ATGCTGATCC AGGTTCATCT GAGGCACGTA ATAAGCGTAG AGAAGATGAA
AATAAAACAA TTTTAGATGA ATTTAGGAAC AATAAACTTG ATGTTTTAAT AAACGTAAGG
ATGTTAACAG AGGGGGCTGA TATTCCTAAT GTTCAAAGTG TCTTTATTAC TCGCCAAACA
ACAAGCTCTA TTCTCATGAC TCAAATGATA GGTAGAGCAT TACGTGGTAA AAAAATAAAA
GGTAACAGTG AAGCAAATGT TGTTTTGTTC TTCGATGACT GGAAACGTTT AATTGATTGG
GCTACACCAC AAATTGGTGA TACTAAAGAT ACAGGAAAAG AATCAACAAT AAAGAGTTAT
CCACTAGAGT ATATATCGAT TCGCTTAGTT GAGGAATTAT CAAAATCAAT TGAGAGCGGT
GGAGTCCATG AAGTAATATT CTCTAAAATT TTTCCTATTG GCTGGTATAA AACTGAAATT
GTATATGCTG ACTCTGACAA AAATAATGAA TCAATAGAAG CGTTTACCGA ATATGTTATG
GTTTATGACC ATACACAATC CAAGCTTAAT AAGTTTATTA ACTTTATTCT TGATTTCAAG
TTGCCAGTTG AGTGGTCTAA AGAATATCTT AATGATGAAT CCCTCGAACA ACAAATCGGA
GAATGGATAG ATTCATGGTT TGATTGGAAA ACTGATAATT TGGGTGACAA ACTTAGTGCT
GATTTAATTA AAATCGTCAG ACATATTGCA CAAAACCAAT CTGCACCCGA ATACTATTCA
TTTGACGAAA GAGAGAATTA TGACTTAGAT AGAATTGCCA AAAGACTTAT TGACTTTTCG
CCGAGAGAAA TAGATAAATA CATAAACGAA GAGTTTGCAA AACCTGGAAC ATTATGGAAA
ACATTTTATA AAACGCCAAA TCGCCTCATA ACATCTGTTC ATTTAGCTAT CATTAAAATT
ATTCACGGGG GTGATAGTGA AATACCTACT ATTACCGTTA TCTCTCCATC TCCACATAAA
GATCGAGAAC TTTCAGAAAA AGAAAAAGTA AAAGTAAAAA AGCGAGACAG TTACACTTGC
TTATGTTGTG GAGCCAATAC TGAAGCTAAA TTACAAGTTG ACCACATTAA ACCATTTTCT
ATGGGTGGGG AAACATCTAT TCAGAATTCA CAAACTTTAT GTAATATTTG TAATAAATGC
AAAGGAAAGA ATGAAATTGA CTTTCGATGT AATACAACAA AGTTGGCTAT TCCCAAAAAT
TTAGATTTAA CATTTAGAAC AGAAAGCCAA CATTCTATAA GAACTTTAAC AAGAGTAGTT
AATTTATTTT ATCATTGCAA AGCCATTTAC AAAATTGAAT GGGACAGTAC CATCCGTGGA
TACATTATAT ATTTATATCC GGGAAATAAT CCTCAATGGT TACTGCAACA TAAAGCACAA
CTGCTGGAGT ATATTCAAGA TAAGCTTGGT CGCCAAGCTT ATAATATTGT GGTCACTACA
AAAGAATAA
 
Protein sequence
MVYVSLDLEQ LREQDTNFVP KSPFQHQIEA FEKLSNTFRL DNKKPGSGIL VLPTGAGKTF 
TAVRWLCDHV VPKNIKILWL APSYYLLDQA FSTFKENARG ISYSKKILNI RCVSSNPSHA
KAASIKSTDD IIIMTVQTAI SNLSPNALDG SGNKVKTPFR KFIENCKETG LFIIVDEAHH
SPAYGCRNLL IGEIGLRSIV PNSNILGLTA TPTYTDKTRR GWLWKIYKDG VNGVIYQADK
EALIAQDILA RPNYIEVSTG TEMVVDDRLY EKLVKQHKDL PESIIETLAN DKHRNNLIVK
TYTSNKDIYG KTIIFADRWF QCVYIKDKLL EKGIKADAIY SHIDADPGSS EARNKRREDE
NKTILDEFRN NKLDVLINVR MLTEGADIPN VQSVFITRQT TSSILMTQMI GRALRGKKIK
GNSEANVVLF FDDWKRLIDW ATPQIGDTKD TGKESTIKSY PLEYISIRLV EELSKSIESG
GVHEVIFSKI FPIGWYKTEI VYADSDKNNE SIEAFTEYVM VYDHTQSKLN KFINFILDFK
LPVEWSKEYL NDESLEQQIG EWIDSWFDWK TDNLGDKLSA DLIKIVRHIA QNQSAPEYYS
FDERENYDLD RIAKRLIDFS PREIDKYINE EFAKPGTLWK TFYKTPNRLI TSVHLAIIKI
IHGGDSEIPT ITVISPSPHK DRELSEKEKV KVKKRDSYTC LCCGANTEAK LQVDHIKPFS
MGGETSIQNS QTLCNICNKC KGKNEIDFRC NTTKLAIPKN LDLTFRTESQ HSIRTLTRVV
NLFYHCKAIY KIEWDSTIRG YIIYLYPGNN PQWLLQHKAQ LLEYIQDKLG RQAYNIVVTT
KE