Gene Ava_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1975 
Symbol 
ID3681538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2449956 
End bp2450423 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content44% 
IMG OID637717316 
ProductMarR family transcriptional regulator 
Protein accessionYP_322492 
Protein GI75908196 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0153804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.896313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCC AACCAGATAA TTCACCAGCT TTAGATTCGT GGCAACAAAA TCTGGCTCCC 
TACAATGTGG GCTATAGAAT TAAGTTACTT TCACAACTGC TTACCCGCAG GTTTACTGAA
ATACTAGAAC CCTTTGGACT GACTCCATTT CATTGGCTAG TTTTATGCTG TCTGTGGCAA
GAAGATGGTT TACCTACTTC GAGTATTGGA GATAAACTCA AGCAAGTTGG AGGTACGCTG
ACAGGTGTAC TAGACCGTAT GGAAGAACGG GGCTTGGTGC GTCGAGAAAG GGATCTACAC
GATCGCCGAA TCTGGCGCAT TTGGTTAACA CACGCAGGTA AAGATTTAGA AGCTGTTTTA
CCACCACTGT CTGCAAAACT ACGCGATGAA GCAATGCAAG GGATTTCTGA TGCTGAACGT
GAACTATTTT CTCAGCTTTT AAATCGGGCG ATCGCTAACC TCTCTTAA
 
Protein sequence
MIAQPDNSPA LDSWQQNLAP YNVGYRIKLL SQLLTRRFTE ILEPFGLTPF HWLVLCCLWQ 
EDGLPTSSIG DKLKQVGGTL TGVLDRMEER GLVRRERDLH DRRIWRIWLT HAGKDLEAVL
PPLSAKLRDE AMQGISDAER ELFSQLLNRA IANLS