| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1969 |
|---|
| Symbol | |
|---|
| ID | 3681629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2445141 |
|---|
| End bp | 2445779 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637717310 |
|---|
| Product | PAP fibrillin |
|---|
| Protein accession | YP_322486 |
|---|
| Protein GI | 75908190 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.125177 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTAACC GACTTTTACT GAGGGAAAAA CTACAAGCAA AACTGGCGGA GATCCAAATT
AACAGTGCTG GCTCTCCTGT TACTAATGTG AAGCTAGATC AAACTATCGC CGCAGAAATC
GAACAGATAA CAACGGAATT AGAAAGCTGC AACCCCAATC CCCAGCCTCT GTTGAATGCT
GCTGCTTTGC TGGAGGGTTC TTGGCAACTG CAATACTCAA CTGCCAGAGA AATCCGTTCT
TTGGATTCCC TGCCATTAGG ACTCAAGGTA GGTAAAGTTT ATCAAGTGAT CGATGTTGCT
AATAAATTGT TTTTTAATTT AGCTTTTGTG CAACATTCTC TGGGATTAAT ATCAGGATAC
GTGAAAGTAA CAGCTAGGTT TGAGCCTGTG ATAGATGATA AATCATCTGC ACCAGACAAA
CGTATCAATG TCTATTTTGA CAAACGCTAT CTATCCATCG AGAAGATTAT TGGCATTGAT
ACCCCCCAAC TCAACCCATT TAAGGTTGTG TCAGCGAACA ATCCTCAAGG TAGAGTTGCC
AGCCTTGACA TTACTTACTT AGACGAAACC TTAAGAATTG GACGCGGGGG CGACGGTAGT
TTGTTTATTT TGCAAAAATC TGATGAACTA TGTAAGTAG
|
|---|
| Protein sequence | MTNRLLLREK LQAKLAEIQI NSAGSPVTNV KLDQTIAAEI EQITTELESC NPNPQPLLNA
AALLEGSWQL QYSTAREIRS LDSLPLGLKV GKVYQVIDVA NKLFFNLAFV QHSLGLISGY
VKVTARFEPV IDDKSSAPDK RINVYFDKRY LSIEKIIGID TPQLNPFKVV SANNPQGRVA
SLDITYLDET LRIGRGGDGS LFILQKSDEL CK
|
|---|
| |