Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1914 |
Symbol | |
ID | 3681691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2376788 |
End bp | 2377417 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637717255 |
Product | 3'-5' exonuclease |
Protein accession | YP_322431 |
Protein GI | 75908135 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.194823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTAC AAGATTTCCA AGTTGGCGAT CGCGACCTTA GTGACGCTGC TGTTGACCAA TATTTACAAT CAGAGGCGAT CGCTGTCGAT ACAGAAACGA TGGGATTGTT ACCCCAGCGC GATCGCCTGT GCTTAATTCA ACTATGCAAC CCAGAGGGTA AGGTAACTGC AATCCGTATA GCCAGAGGGC AAACCGCAGC GCCTAATCTC AAAAAACTCC TAGAAGCAAC AAACGTCCTC AAAGTTTTCC ACTTCGCTCG GTTTGATGTG GCTACCTTGC GTCACCATCT GGATATTCAT GTCCAGCCAA TTTTCTGCAC CAAAATCGCC AGTAAGTTAG CCCGCACTTA CACCAATCGC CACGGACTTA AAGATTTGGT GTATGAGTTG GAACAAGTAG AACTAGATAA AAGCGCTCAA AGTTCGGATT GGGGAAACGC TGCAAATTTA ACTGACGCAC AACTCAGTTA CGCCGCCAAT GATGTCCGCT ATTTACTCAG CGCCCAGCAA AAGTTAGTCG CCATGCTCAA ACGCGAAGAA CGCTGGGAAC TAGCACAACA ATGCTTTCAA GTCCTACCAA CAATTGTTTC TCTAGATTTA TTACAGTTCA AGGATTTGTT TGAACATTAA
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Protein sequence | MTLQDFQVGD RDLSDAAVDQ YLQSEAIAVD TETMGLLPQR DRLCLIQLCN PEGKVTAIRI ARGQTAAPNL KKLLEATNVL KVFHFARFDV ATLRHHLDIH VQPIFCTKIA SKLARTYTNR HGLKDLVYEL EQVELDKSAQ SSDWGNAANL TDAQLSYAAN DVRYLLSAQQ KLVAMLKREE RWELAQQCFQ VLPTIVSLDL LQFKDLFEH
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