Gene Ava_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1886 
Symbol 
ID3681799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2339533 
End bp2342016 
Gene Length2484 bp 
Protein Length827 aa 
Translation table11 
GC content41% 
IMG OID637717227 
Productpeptidase 
Protein accessionYP_322403 
Protein GI75908107 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.582939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTTG ATAATGCAGG TAACACATTA ACTACTGCTA GAAAGCTCAC TGTATCTTCT 
AATATTCAGA CTTTCGCAGA TCGTGTGGAT TCGACAGATC CTAATGATTT TTATAGTTTC
AGTTTGTCCG CTCGTAGTAG TCTTAATATT GCCGTTGATG GTTTGAGCGC TAATGCAGAT
TTGCAGTTAA TCAGAGATAC TAACAGCAAT GGTTTAGTTG ATAGCGGCGA AGTTCTCAAC
ACTTCTAACA AGACTGGAAC TGGTAGTGAA TCAATTCGCA GGACGCTAGA TGCCGGTAAG
TATTTCATCA GAGTCTATTC CAACACTGGC GATACTAACT ACAATCTCAA GGTATTTGAA
AACTTTACCC CAACTTCACT AGAGTTTAAG CTAAATGAAA GCACTCTCAA AGCAACAGAT
ACACTTAATA TCAACAGTGG TTGGGTATCA GATAGAAATG GTATCAGCGA CCTTTCTAAG
GTGGATTTCC GTATACAAAG AGCAAACGGA AGCTGGATAG ATGTAGCTGA TGCTACTCAA
TTTACTGTCG ATCCTAACAA TACAAATAAG GCCGGTTTCA GCTATAGTTT GTCTCTCAAC
AGCTTGAATT TAGCTGCTGA CACTTATACT CTCCAAGGCA TAGCTTATGA CAAGACTGGT
GCTGCTAGTA ATACAGTACG CTTAAGTCTG ACGATTGAGA ATCCTGGACT CACATTAACT
AATGCGAAGA AAATAACTTT ATCTGAAAAG ACTCAGACTT TTACAGATAG GGTGGATTCA
ACAAATATCA ATGATTTCTA CAGTTTCAGT TTGTCTGCTC GTGGTAACCT GAATCTCGTT
GTTGATGGTT TGAGTGCCAG TGCAGATGTA CAGATTATTA GAGACGCTAA CAGCAATGGC
TTGTTTGATG GCGGCGAAGT TGTTACTGGT GCTTACAGAA CTGGAAGCGG TAGTGAATCG
ATCCGCACAA CTCTAGATGC TGGCAATTAT TTCATTAGAG TCTATTCACA AGGTGGCAAT
ACTAATTACA AACTCAAGGT ATTTGAAAAT TTTGCCCCAA CAGCACTAGA TTTTAAGCTG
AACAACACCA GCCTCAAACC AACAGACACC CTCAGTATCA ACAGTGCTTG GGTATCGGAC
AAAAACGGTG TGAGCGACAT TTCTAAAGTA GATTTCCGCA TTCAAAAAGC AGACGGAAGT
TGGATAGATG TGGCTGATGC TACTAAATTT ACTGCCGATT CTAGCAATGC AAATAAGGCA
AGTTTCAGCT ACAGTTTGTC TTTAAGTAGC TTGAATCTGG CAGTTGGCAC ATATACTCTT
CAAGGAATAG CTTACGACAA GACTAATGCT GCTAGTAATA CAGTCAAGCA GACATTTACA
GTCACGACCA CACCAACCAC AACAGCATCG GCTACTGTTC AAGATTGGTT CAGTCAAAAT
CTTCTCGACC AACAACTCAT TACATTAACA CGCAACTTAG CTGCTGACGG TAACTTAAGT
CGCCAGGATA TGCTGGATAT CTTCAGAAAT GTGCAAGATG ATTCTAAGGT AGATGCTAAT
GAAGTAAAAG ACCTCAGAAC ATTGGTAGGT GCTAGCACTC GTTTTAGTAT GCAAGACCCT
GTAAAATGGC TATCTACACA GGTTGCTAAT GGTGCGTCTG TAGATATGGC GGCTAGCGAT
TTTGAATCTA GTCTAGTTGG TCGTTGGTTC TTAGGCACAG TAGCACCAAC ACCCGTCTTT
AATGGTAAGA CTCTCACCTA CACCCTGGCG ACAGGTAATC TTTTTGGTAG TGCTAACGAA
GCACGAATTG GTGATATTGA CCAAGGACAA CTAGGTGATT GTGCATTTTT AGCAGCTTTG
GGTGCAACCT TTGGTCGTCA GTCTAATGAT GCAGGCAATG CTTCTAGTTC CGTCATCAAT
AGTATGATTA CAGATAATGG TGATAACACT TATACTGTGC GTTTTTACTC AACGACAATT
TTTGACCCTG GTGAAGCACA ATATGTAACA ATTGATCGTC GTATCGCTAC AAGTGTAGCT
GCTAAAACTA ATGGCGGTGT TCTCTGGGTA GCTTTAGTAG AAAAAGCTTA TGCCCAATGG
CGCGAATGGA GAGAAGGCAA GCCTGGTTAT AATATCATTG GCAATGGAGA TGCGCTTTCT
CGTCCTCTTC AATTTGTGAC TGGACGTGAC TTTACTCCTG CTGATCCCAC CAATATTAAT
TGTTTCTCTA CTATCGAGAC TGCTTTAGCT AATGGGAAAG CTGTAACAGC AGCCAGAATG
GGTGATAGCA CGAGCTATAT TGTAGGGAAT CATGCTTACT CTGTGACGAA TGTTTACACC
AATACTAGTG GTGAGAAAAG ATTTGTGGTA CGTAATCCTT GGGGCAAAGA TGGCAAGACT
AGGACTGGTG CTGACGATGG ATTCATTGAC TTATCTTTTG ATGAGTTTAG CAAGGCTTTT
AATTATGGAG TTATCATTGC TTAG
 
Protein sequence
MTLDNAGNTL TTARKLTVSS NIQTFADRVD STDPNDFYSF SLSARSSLNI AVDGLSANAD 
LQLIRDTNSN GLVDSGEVLN TSNKTGTGSE SIRRTLDAGK YFIRVYSNTG DTNYNLKVFE
NFTPTSLEFK LNESTLKATD TLNINSGWVS DRNGISDLSK VDFRIQRANG SWIDVADATQ
FTVDPNNTNK AGFSYSLSLN SLNLAADTYT LQGIAYDKTG AASNTVRLSL TIENPGLTLT
NAKKITLSEK TQTFTDRVDS TNINDFYSFS LSARGNLNLV VDGLSASADV QIIRDANSNG
LFDGGEVVTG AYRTGSGSES IRTTLDAGNY FIRVYSQGGN TNYKLKVFEN FAPTALDFKL
NNTSLKPTDT LSINSAWVSD KNGVSDISKV DFRIQKADGS WIDVADATKF TADSSNANKA
SFSYSLSLSS LNLAVGTYTL QGIAYDKTNA ASNTVKQTFT VTTTPTTTAS ATVQDWFSQN
LLDQQLITLT RNLAADGNLS RQDMLDIFRN VQDDSKVDAN EVKDLRTLVG ASTRFSMQDP
VKWLSTQVAN GASVDMAASD FESSLVGRWF LGTVAPTPVF NGKTLTYTLA TGNLFGSANE
ARIGDIDQGQ LGDCAFLAAL GATFGRQSND AGNASSSVIN SMITDNGDNT YTVRFYSTTI
FDPGEAQYVT IDRRIATSVA AKTNGGVLWV ALVEKAYAQW REWREGKPGY NIIGNGDALS
RPLQFVTGRD FTPADPTNIN CFSTIETALA NGKAVTAARM GDSTSYIVGN HAYSVTNVYT
NTSGEKRFVV RNPWGKDGKT RTGADDGFID LSFDEFSKAF NYGVIIA