Gene Ava_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1717 
Symbol 
ID3682138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2154860 
End bp2155555 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content43% 
IMG OID637717057 
Producthypothetical protein 
Protein accessionYP_322234 
Protein GI75907938 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.532829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGCT TGAATCACTG GAAATCTGGA GCTGCCGCAC TCATGGCATT AACAGTCACA 
ACAGGAACCG TTGCCCCCAT CATTGCCTTT GCACCGGCTG CTAATGCCCA ATTAATTGGT
CAAACTCGGA GAGTTTCTAT TCCTGCTGGA GTGACTTTTC CTGTTACCTA CGATAAAGAG
CAAGTAGTTG TTAGTCGTGG AGAAACTATA TCTTTAACTC TAAAAATAGC TAACAATATT
ATCGACAATA ACAGGAACGT TTTGATTCCT GCGGGAACTG AAGTTGTGGG ACAACTAGAA
CCCGTATATT TCAACGGTAA TTTCTCCCAA GACAGAAATG ACCAAAGTAA TGTCAGAGGT
GTAAGGTTCG TCGCCAGAGA ATTAATATTT CCTTCTGGTA ATAGACAGTC AATCAGCGCC
AATTCTCAAA CTGTTACTAG ACTAGAAAAA ATTAGCAGAA ATGACTCTGG CAAAATCTTA
ACTGATGCTG CTATTGGTGC AGGTGCTGCC ACAGCAATTT CTTTGATTAC AGGTAATCGC
CGAATTGAAA TTTTAGAACC TGTAGGTGGT GCAGCAGCAG GCGCTTTAGC TAGTGTATTA
CTACGCAAGA AAGAAGCTGA AGTCTTTGTG GTCAGACCCC AACAAGATTT GCGACTAGCC
CTGAGTTCTA ACTTGACAGT GGATGTTTTC CGCTAG
 
Protein sequence
MTRLNHWKSG AAALMALTVT TGTVAPIIAF APAANAQLIG QTRRVSIPAG VTFPVTYDKE 
QVVVSRGETI SLTLKIANNI IDNNRNVLIP AGTEVVGQLE PVYFNGNFSQ DRNDQSNVRG
VRFVARELIF PSGNRQSISA NSQTVTRLEK ISRNDSGKIL TDAAIGAGAA TAISLITGNR
RIEILEPVGG AAAGALASVL LRKKEAEVFV VRPQQDLRLA LSSNLTVDVF R