Gene Ava_1693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1693 
Symbol 
ID3682249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2121129 
End bp2122049 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content41% 
IMG OID637717032 
ProductFatty acid desaturase 
Protein accessionYP_322210 
Protein GI75907914 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCAT TGGAGGCACA GCAGTTACCA AAAATCCCAC CAAAGGAATT TTTAGCGCCT 
CCTGGTGATT TTAACCCCAC GATGCTTTTA TTTTCGGCAT CGGTGGCTAT GTTAGTTTTG
TCGAACTTTG GTTATTGGCT TTGGCAATGG CCTCATTGGC TATGCTTCAG CACAAATACC
TTAGCTTTAC ATTGTGCCGG GACAGTCATT CACGATGCTT GTCATCAATC TGCCCACCGG
AATCGGATAA TTAATGCCAT GTTAGGTCAT GGCAGCGCTT TGATATTAGC TTTTGCTTTT
CCAGTCTTTA CACGGGTACA TTTGCAGCAT CACGCCCATG TTAACCACCC CAAAGATGAT
CCTGATCATT ACGTCTCTAC AGGTGGGCCA CTGTGGTTAA TCGCTGTGCG GTTTTTGTAC
CATGAGGTAT TTTTCTTTCA AAGGAAGCTG TGGCGCAAAT ATGAACTGCT GGAGTGGTTT
ATCAGTCGCT TAATTGTCAT TACAATTGTT TACATTTCCG TTCAATACCA TTTCCTGGGC
TACATTCTCA ATTTTTGGTT TATCCCCGCA TTTATAGTTG GTATAGCTCT AGGACTATTT
TTTGATTATC TGCCCCATCG TCCTTTTGTA GAACGCGATC GCTGGAAAAA TGCCCGTGTC
TACCCTGGAA AGTTGCTCAA CATCTTAATC ATGGGACAGA ACTACCACCT AATTCATCAT
TTATGGCCTT CCATCCCCTG GTATAACTAT CAGCCAGCTT ATTATGTAAT GAAGCCATTG
TTAGATGAGA AAGGCTGTTA TCAAACATCA GGATTGTTGC AGAAAAAAGA CTTTTTTGAA
TTTGTTTATG ACATCTTTTT AGGGATCAGA TTTCACCATC ACAAAGAAGG AAAAATTTCA
AGTAATAATC TAGAGGCATA G
 
Protein sequence
MLSLEAQQLP KIPPKEFLAP PGDFNPTMLL FSASVAMLVL SNFGYWLWQW PHWLCFSTNT 
LALHCAGTVI HDACHQSAHR NRIINAMLGH GSALILAFAF PVFTRVHLQH HAHVNHPKDD
PDHYVSTGGP LWLIAVRFLY HEVFFFQRKL WRKYELLEWF ISRLIVITIV YISVQYHFLG
YILNFWFIPA FIVGIALGLF FDYLPHRPFV ERDRWKNARV YPGKLLNILI MGQNYHLIHH
LWPSIPWYNY QPAYYVMKPL LDEKGCYQTS GLLQKKDFFE FVYDIFLGIR FHHHKEGKIS
SNNLEA