| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1618 |
|---|
| Symbol | |
|---|
| ID | 3679175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2026617 |
|---|
| End bp | 2027600 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637716958 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_322136 |
|---|
| Protein GI | 75907840 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0803612 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0682 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCTGT CTCGTGATGT TGTTTTATTA ATCACTCACA GTGGTGATTT TTTCACAATA
GATAGAGTGG CAGAGGCCTT GGCAAAAAAA GGAGTGCAAC CGTTTCGTTT AGATACCGAC
AAGTTTCCTC TACAAGTGCA ATTAACAGCA CATTTTGACA AGTCTCAAAG CCACCACACT
ATAGAATATG ACAACCACTC TATCAGCACA GAGCAGGTGC AGGCTGTATG GATGCGTCGT
ATTTGGGAAC CAAACCTGAG TCAAGAATTA GCGCCAAAGT TCCAAGAAGC CTGCATTAGA
GAATCAAAAG CAACTTTAGA TGCTTTTTGG GACAGCCTCA AGGGTGCTAG ATGGGTAGAT
GATTTAGAAC GGATAAATTA TGCAAATAAT AAGCTGCGTC AACTGCGAAT TGCGTCTGAG
GTAGGTTTTG TTATTCCCCA AACTCTTGTC ACCAACAAAG CCCAAGCAGC CAGAGAATTC
TTTGGGCAAG TCAACGGCAA AATGGTGAGT AAGCTTTTAA CCACTCTTTC CCGGAGTATG
GAAGCCAATT CTTCATTTTT CCTTTACACC AGCATCGTTA AAGAAAAAGA CTTAGAAGAT
GCCGAGTCAC TACGCTACTG TCCAATGGTT TTTCAAGAGC AAATCCCCAA GCAGATGGAG
TTGCGGGTAG TGTATGTAAA TGGCCATGTA TTTGTGGGGG CGCTGAATGC AGATGTGTAT
GCAGCAACCA AAGCTGATTG GCGTAAACCA GGTGTTGAAG TGGGCGCATG GCAACACCAC
CAACTTCCTG ATGAATTGGT TCGTCGCCTG CAAGCTTTTA TGGGGAAATT TGGGCTGTTA
TTTGGTTCGT TAGATTTCAT TCTCACACCA TCAGGGGAAT ATGTCTTTTT GGAAGTCAAC
CCCATAGGCG AATGGGGAAT GCTGGAGAAA GATTTAGACT TACCGATTGC GAATGCGATC
GCAGATATTC TACTTCAAAA TTGA
|
|---|
| Protein sequence | MHLSRDVVLL ITHSGDFFTI DRVAEALAKK GVQPFRLDTD KFPLQVQLTA HFDKSQSHHT
IEYDNHSIST EQVQAVWMRR IWEPNLSQEL APKFQEACIR ESKATLDAFW DSLKGARWVD
DLERINYANN KLRQLRIASE VGFVIPQTLV TNKAQAAREF FGQVNGKMVS KLLTTLSRSM
EANSSFFLYT SIVKEKDLED AESLRYCPMV FQEQIPKQME LRVVYVNGHV FVGALNADVY
AATKADWRKP GVEVGAWQHH QLPDELVRRL QAFMGKFGLL FGSLDFILTP SGEYVFLEVN
PIGEWGMLEK DLDLPIANAI ADILLQN
|
|---|
| |