| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1603 |
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| Symbol | |
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| ID | 3679160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1978060 |
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| End bp | 1980693 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637716943 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_322121 |
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| Protein GI | 75907825 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc)
[TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTG TACCTTTACA TATTCATAGT GATTACAGCC TGCTGGATGG GGCTAGTCAG
CTACCTGAGT TGATTGATCA AGCGATCGCC TTGGGTATGA AAGCGATCGC TGTTACCGAT
CACGGTGTCA TGTATGGTGC GATCGAACTA CTGAAAATTT GCCGCAGTAA GAATATTAAG
CCCATCATTG GCAACGAAAT GTATATCCTG AACGGCGACC TGGCAAAACA AGAACGTGGT
CGCCCTAAAT ATCATCAAGT TGTTTTAGCT AAAAATACTA AAGGTTACAA AAATTTAGTC
AAATTAACTA CAATCTCTCA CCTCCAAGGT GTACAAGGTA AAGGTATTTT TTCTCGCCCT
TGTATTAATA AAGATTTGCT CAAGGAGTAT CATGAGGGCT TAATTGTCAC CAGTGCTTGC
TTAGGTGGAG AAATTCCCCA AGCAATTCTT AGCAACAGAC CAGATGCAGC GCGGAAAGTT
GCCAAGTGGT ATAAAGATGT TTTTGGTGAT GATTTTTATT TAGAAATTCA AGACCACGGA
TCACAAGAAG ACCGTATTGT CAACGTAGAA ATTATTAAAA TTGCCCGTGA GTTAGATATT
AAATTTGTTG CTACCAATGA TTCCCATTAC ATTTCTTGCT TTGATGTAGA AGCACACGAC
GCATTGCTAT GTATTCAAAC TGGCAAGCTA ATTAGTGAAG ATAAGCGAAT GCGGTATAGC
GGTACAGAAT ATCTCAAATC TGGCGAAGAG ATGAAGTTGC TATTCCGCGA CCATTTAACC
GATGATGTAA TTGCAGAAGC GATCGCCACC ACAGAAGAAG TCGCTGATAA AATCGAGCCT
TACCATATTA TGGGTGAGCC TCGTATTCCC AACTACCCAA TTCCTTCAGG TCATACTCCT
GATACTTATG TCGAAGAAGT TGCATGGCAA GGACTATTAG ACAAACTCAA TCGTAAATCC
CGCAACGAAG TCGAGCCAGT CTACAGAGAA CGGCTAGAAT ATGAACTCAA AATGTTGCAA
CAAATGGGAT TCTCCAGCTA CTTTTTAGTA GTGTGGGACT ATATCAAATT TGCCAGAGAT
AATAATATCC CTGTGGGGCC TGGTCGGGGT TCGGCGGCTG GTTCCTTAGT TGCGTACACA
ATGGGAATTA CCAACATTGA TCCGGTACAT CATGGGTTAC TCTTCGAGCG ATTTTTGAAC
CCAGAACGTA AATCAATGCC TGATATCGAT ACAGATTTCT GTATTGAACA ACGGGATAAA
GTAATTGAAT ATGTAACAGA TAAATATGGG AAAGAAAGAG TCGCCCAAAT CATTACTTTT
AACCGTCTAA CTTCCAAAGC AGTTTTAAAA GATGTCGCCA GAGTGTTAAA CATTCCCTAT
GGGGAAGCCG ACAAAATGGC GAAATTAATT CCTGTAGTCC GGGGTAAACC AACTAAACTG
AAGGTGATGG TTTCTGACAC CACTCCAGAA CCAGAGTTTA AAGAAAAATA TGATAATGAC
CCCAGAGTCC GCCATTGGTT AGATATGGCG ATGCGAATCG AAGGAACTAA CAAAACCTTT
GGTGTTCACG CCGCCGGTGT AGTCATTTCT GCTGATCCAT TAGATGAAAT TGTCCCACTG
CAAAAAAATA ATGATGGGTC TGTAATTACT CAATATTTCA TGGAAGACCT GGAATCAATG
GGTTTGTTAA AAATGGACTT CTTGGGATTA AAAAACCTGA CGATGATTCA AAAAACAATT
GATTTAATTG AAGAAAAACA CGGCTTTAGA ATCGACCCTT ACGAAATCAC CAGTCAAGAA
CGTAAGGCAC AAAAGATATT AGCTAAAGGT GAATATAAAA CTTTACCAAA AGATGTCCAA
AAGACTTATG AATTGTTGGA ATCAGGTGAA TTAGAAGGTA TATTTCAATT AGAATCTTCA
GGGATGAAAC AGATAGTACG AGATTTGAAG CCTTCTAATA TTGAAGATAT TTCTTCTATC
CTGGCACTTT ACCGACCAGG CCCTTTAGAT GCTGGATTAA TTCCTAAGTT TATTAACCGT
AAACACGGGC GGGAAAATAT CGATTATGAA AGCCAAGTTT TAGAACCAAT CTTAAATGAA
ACCTATGGAA TCATGGTCTA TCAGGAGCAA ATCATGAAAA TTGCTCAAGA TATGGCTGGT
TATACCTTAG GACAAGCCGA CTTGCTACGT CGTGCGATGG GTAAAAAGAA AGTTTCGGAG
ATGCAGAAGC AGCAAGAAAA ATTTATCGAT GGTTCAACAA AAAATGGTGT CAAGAAGCAA
GTAGCTGAAA AGCTATTTGA GGATATGTTG AAATTCGCCG AATATTGCTT AAGTTACGAT
ACAGAAGTTT TAACAGTTGA ATATGGATTT GTACCTATTG GTGAGATTGT AGACAAAGGT
ATTGAGTGTA GTGTATTTAG CATTGATAGT AATGGTATTG TTTACACCCA ACCTATTGCT
CAATGGCATC ATCGAGGTAA ACAAGAAGTA TTTGAATATT GTTTAGAAGA TGGGTCAATA
ATTAAGGCAA CAAAAGACCA CAAATTCATG ACTCAAGATG GCAAGATGTT GCCAATTGAT
GAAATATTTG AACAAGAGTT AGACTTGCTG CAAGTCAAGG GTTTACCGGA GTAA
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| Protein sequence | MSFVPLHIHS DYSLLDGASQ LPELIDQAIA LGMKAIAVTD HGVMYGAIEL LKICRSKNIK
PIIGNEMYIL NGDLAKQERG RPKYHQVVLA KNTKGYKNLV KLTTISHLQG VQGKGIFSRP
CINKDLLKEY HEGLIVTSAC LGGEIPQAIL SNRPDAARKV AKWYKDVFGD DFYLEIQDHG
SQEDRIVNVE IIKIARELDI KFVATNDSHY ISCFDVEAHD ALLCIQTGKL ISEDKRMRYS
GTEYLKSGEE MKLLFRDHLT DDVIAEAIAT TEEVADKIEP YHIMGEPRIP NYPIPSGHTP
DTYVEEVAWQ GLLDKLNRKS RNEVEPVYRE RLEYELKMLQ QMGFSSYFLV VWDYIKFARD
NNIPVGPGRG SAAGSLVAYT MGITNIDPVH HGLLFERFLN PERKSMPDID TDFCIEQRDK
VIEYVTDKYG KERVAQIITF NRLTSKAVLK DVARVLNIPY GEADKMAKLI PVVRGKPTKL
KVMVSDTTPE PEFKEKYDND PRVRHWLDMA MRIEGTNKTF GVHAAGVVIS ADPLDEIVPL
QKNNDGSVIT QYFMEDLESM GLLKMDFLGL KNLTMIQKTI DLIEEKHGFR IDPYEITSQE
RKAQKILAKG EYKTLPKDVQ KTYELLESGE LEGIFQLESS GMKQIVRDLK PSNIEDISSI
LALYRPGPLD AGLIPKFINR KHGRENIDYE SQVLEPILNE TYGIMVYQEQ IMKIAQDMAG
YTLGQADLLR RAMGKKKVSE MQKQQEKFID GSTKNGVKKQ VAEKLFEDML KFAEYCLSYD
TEVLTVEYGF VPIGEIVDKG IECSVFSIDS NGIVYTQPIA QWHHRGKQEV FEYCLEDGSI
IKATKDHKFM TQDGKMLPID EIFEQELDLL QVKGLPE
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