Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1578 |
Symbol | |
ID | 3681121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1949489 |
End bp | 1950283 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637716918 |
Product | isochorismatase hydrolase |
Protein accession | YP_322096 |
Protein GI | 75907800 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.488451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAGT CTTTACGCAC ATTGGGAGTA GCGCCAAATG CTTGGATGGT GAATCAAGCG ATCGCAGATA TCACTCGTCC GCAAAAGACC CCACAACCCG TTATCTTATC AACAGAAACC AAAACTCTGC GCCTAGACTT GGCAAAAACA GCCATTATTG TCATAGATAT GCAAAACGAC TTCTGTCACC CAGATGGTTG GTTAGCCCAT ATCGGCGTAG ATGTGACACC AGCAGCTAAA CCCATCGTAC CTTTAAATAA TTTACTGCCA GAATTGCGTG CGGTTGGTGT GCCTGTAATT TGGTTAAATT GGGGCAATCG TCCCGACTTA CTGAACATTA GCGCCAATTT ACTTCATGTT TACAATCCTA CAGGAGAGGG GGTGGGGTTA GGCGATCGCT TACCCAAAAA CGATGCTAGA GTACTGATGG CAGGTAGTTG GGCGGCAGCA GTCGTAGACG AACTCCAGCA ATTACCACAA GACATTTGTG TGGATAAATA CCGCATGAGT GGCTTTTGGG ACACACCTTT AGATAGTATT TTAAAAAACC TGGGAATTAC AACAATATTG TTTGCTGGCG TTAACGCTGA TCAATGCGTA CTGACTACCT TATGTGATGC TAACTTCTTA GGATACGACT GTATTTTAGT CAAAGATTGT ACTGCTACAA CTTCTCCCGA TTATTGTTGG TTAGCGACCT TATATAACGT TAAACAATGC TTTGGTTTTG TTAGTGATTC ACAAGCAATT TTCACAGCCC TAAATCACCC TGAAGCCACA GGAAGGGATA AATAA
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Protein sequence | MDQSLRTLGV APNAWMVNQA IADITRPQKT PQPVILSTET KTLRLDLAKT AIIVIDMQND FCHPDGWLAH IGVDVTPAAK PIVPLNNLLP ELRAVGVPVI WLNWGNRPDL LNISANLLHV YNPTGEGVGL GDRLPKNDAR VLMAGSWAAA VVDELQQLPQ DICVDKYRMS GFWDTPLDSI LKNLGITTIL FAGVNADQCV LTTLCDANFL GYDCILVKDC TATTSPDYCW LATLYNVKQC FGFVSDSQAI FTALNHPEAT GRDK
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