| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1556 |
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| Symbol | |
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| ID | 3682288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1910952 |
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| End bp | 1915910 |
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| Gene Length | 4959 bp |
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| Protein Length | 1652 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637716896 |
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| Product | ribosome assembly protein 4 (RSA4) |
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| Protein accession | YP_322074 |
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| Protein GI | 75907778 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.123778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.225056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATG ATTTAGTAAA TAACGATCGC TCTGTGCAAC AATTAGCCTG GGCGATTGAT
GCTTCTGTGG GACAGTTTAA GTTGATTTTG GCACGGTGTA ATTATGCCAG CTTACGCGAT
CGCTTAATCA AAAGATTACA AGAAATTTGC CAAGCGGAAA TTTATGTCTT GGAAGTACAG
CAATCTGATA AAACCCTCTA TACTGCCATT CGGGATGAAT TTGGCGCAGA GATTCTTGGT
TGTGTGATGG TTGTTGGTTT GGAAAAGGTG CAGAATTTAG CAGTGATGTT AAGTTCAGCC
AATCAAGTGC GCGAGGAATT CCGCCAGCAT TTTCATTTCC CTTTGGTGTT GTGGATTGAT
GATGAAATTT ATAAACAATT AATTCAAGTT GCACCTGACT TAGAAAGTTG GGCAGTTACG
AGAAATTTTG CTATTGACCA ACAACAATTA AGAGATTTTA TTACTGAAAC GGCTCATCAA
TATTTGCATG AACAGACTAA ACTGACTCTC CATGAATCAC TAAAGCTAGA AACTGAGTTA
TTAGCAGCCC AAAGAGATTT ATTTATAGAT GGACAGATAG ATAATTCAGA ATTAGCGGCT
AATTTATTAT CATTACTGGG CTTAACTAAT AAGAATATCA ATAAAATTTC AGCCGCGCTA
GAATATTATC ACCAAGCTGG TAGTTTATGG CAAAAACTTG ATTTGATTGC ACCTCAAGAA
TTTATTTTTT TAGAGACTGC TTTTTGTTAT TATATTCAAA GTTACAAATA TCAAGATATC
AATCATATAT CTTGGAATAA TACGCGGCGT TATATTCAAG AATATATTGA TTTTGTTAAC
CAGATTCAAC GTGCAGATTT AGTTGCTAAA TCTCTTTATA AGTTAGCTAC TATTTTACGT
AATCTTAAAG CCTGGGAACA GTTAGAAAAG CTATCCCAGC AAGCTTTAGT CATTCATCAA
GCAAATAATA ATCATAGAGA AATTGCTAGG GATTATGCTT GTTTAGCCGA GGTAGCTTTA
GCCCAAGAAA ATTGGCGACA GGCAAATCAA TTAATTAACC AAGCATTAGA TTTTATATCA
GCCGATAAAT CAGAGAATCT ACTTTCAGCA CCAGAATTAA GCTTGTATAG ATTTATTCAG
GGTTGCTCTC AATATAATTT AGGGCAAATC CCCCAGGCGA TCGCCAACTT AGAAGATGCT
ATAAATAGGT TAAATCCTCA AGAAGATGTC AGACTTTATC TGCATATTCT CAGTTATTTA
CATAATTTTT ATTTCACTCA AAAAAAATAT CTTGCAGCCT ATGAAATTAA ACAGCAGTCG
CTTTCCATTG AACAACAATT TGGCTTGCGG GCTTTTATTG GTGCAGGAAG ATTAGAAGCA
CGTAAGCAAA CACATTTAGA AACCTTATCT ACAACTTCTC TACAAGATAA TATTGCCTTA
GAAATTGCTG CATCTGGTCG TCAATTAGAT GTAGAACGTT TAATAGAACG CGTCGGTCGC
CCCGATTATA AATTGATAGT CATTCATGGG CAATCGGGCG TGGGTAAAAG TTCCCTGATT
AATGCAGGTT TAGTCCCGGC TTTAAAGAAA AAAGCCATTG GTGTGCAAGA TAATTTAGTC
GTCGTTATGC GTGTTTACAC CAACTGGCTG CAAGATTTGA CGCGCATTTT GATAAAAGAT
GGGGGACAAA GAGAAGGAGA ACCTCAACAT TCTAGTTCAG AACCTCAACG TTCTCCTTCA
GAACCTCAAC ATTCTAGTTC AGAACCTACT GTTCCCCTTT CTTCTTCCTT TCTCTCCTCA
TTACTCATCA CCAAGTTGCG TGAAAACGAA CAACACAACC TCCGCACAGT GTTAGTTTTT
GACCAATTTG AGGAATTTTT CTTCGTTTAC CCCGAACTTG GACAACGAAA ACAGTTCTTT
GAGTTTCTAG GAGAATGTCT GCACGTTCTT TCAGTGAAAG TTATTTTATC GTTGCGGGTA
GATTACATCC ATTATTTGCT GGAATGTAAT GATTTGCCGG AATTTCAGAT TATTGGTAAT
GACATTCTCA GTAACAACGT GCTTTATAAG TTGGGCAACT TCTCTCCCAA CGATACAAAG
TCTATTATCC AGCGTCTCAC TGCAAATACT AGCTTTAACT TAGAACCTAA TTTAATAGAT
GCACTGGTAG AAGACTTAGC AGGAGAATTG GGTGAAGTGC GCCCCATTGA GTTGCAAATT
GTAGGAGCGC AATTACAAAC CGAGAATATC ACCACCCTAG AAAAATATCG GCGTTTCGGC
ACAAAACAAG ACTTAGTACA GCATTATTTA AATGAGGTTA TCCATGACTG CGGTGAAGAA
AATCAGCAAT TAGCGGAGTT TTTGCTGTAT TCGCTGACTG ATGAAAGAGG AACTCGTCCC
CTAAAGACAC GGGGAGAATT AGAACGAGAT TTTCAGCAAT ATTTTTCTAC TTATGATGTG
GAATCTGCGC GGATTTCCCC AACCCCACGG CAAAAACAGG GCAAAATTAC GCCAAAAACT
TCACAACAGG CTGTGAGAAA AGAGCAAATC TTAAATCTCC AGCAATTCGA TTTAGTTTTA
GATATTTTCG TCAAATCTGG CTTAGTTGTG TTGCTCCCAG AAAAACCCAC TGACCGTTAT
CAACTGGTGC ATGACTATTT AGCCGCCTTT ATCCGCCAGC AACAACAACA GAAATTAAAA
CAGGTAATGG CGGAACTAGA CAAAGAAAGA GCGCAAAGAA AACTAAGTGA AGCCAAACTT
TATCGCTTTC TGCAACGTGC TTTGTTTAGT TCAGTGGCTG TGGGTATAGG TATTGTTGTT
TTAACCGCTT TAGCAGTGCA GTTAGCAAAT GAAGCCAAAA AACAGACACA AAACGCCGAA
ATTAGTGCTG GAATTAACGA AATTAACGCC TTGAATAATT CTTCAGAAGC TTTTTTTGTC
TCCAAACAAT ATCCTGATGC TTTGATAGAA GCACTAAAAG CAGCTAACAA ACTCAAGGGT
ACACCGTGGG AGAGAGAAAA CAGTTTTGCC ACAATACAAA CTGCGGCAAC TTTACAGCGA
GCTATCTACT TACAGCCCAA TGAATATAAA GAAAATCGTG CCACAGAGGT GAATACTTTG
GCAGGTCATG AAAATTGGGT GAGTAGTGTC GCCTTTGCCC CACAAAAACG ACAGTTAGCC
TCTGGTAGCG GTGATAAGAC AGTTAAAATT TGGGATATCA ACAGTGGTAA AACTCTAAAA
ACCCTCTCCG GTCATAGTGA TTCCGTCATC AGCATCGCCT ATAGTCCCGA TGGGCAACAA
TTAGCTTCTG GTAGTGGTGA TAAGACAATT AAAATTTGGG ATATCAACAG TGGTAAAACG
CTGAAAACCC TCTCCGGTCA TAGTGATTCC GTCATCAACA TCGCCTATAG TCCCAACAAA
CAACAATTAG CTTCTGCCAG TGATGATAAG ACAGTTAAAA TTTGGGATAT TAACAGTGGT
AAAAGCCTAA AAACTCTCTC TGGCCATAGT CATGCAGTGA GAAGCGTTAC CTACAGTCCC
GATGGAAAAC GGTTGGCTTC CGCTAGTCGA GACAAGACCA TCAAAATTTG GGACATCAAC
AGTGGTCAAC TCCTGAAAAC TCTTTCTGGT CATAGTGATG GGGTAATTAG TATTGCTTAC
AGCCCCGACG GAAAACATTT AGCCTCCGCC AGTAGCGACA AGACCATCAA AATTTGGGAC
ATCAGCAATG GTCAACTCCT GAAAACTCTC TCCAGTCATG ACCAGCCTGT TTATAGCATC
GCTTACAGCC CCAATGGACA ACAGTTAGTT TCTGTCAGTG GTGATAAGAC CATCAAAATT
TGGGATGTCA GCAGTAGTCA ACTCCTGAAA ACCCTCTCTG GTCACAGCAA TTCAGTCTAT
AGTATTGCCT ACAGTCCCGA TGGCAAACAG TTAGCTTCCG CCAGTGGTGA CAAGACCATC
AAAATTTGGG ATGTCAGCAT CAGTAAACCC TTAAAAATAC TCTCTGGTCA TAGTGATTCT
GTTATCAGCA TCGCCTACAG TCCCAGTGAA AAACAATTAG CCTCTGGTAG TGGTGACAAC
ATCATCAAAA TTTGGGATGT CAGCACTGGT CAGACCCTCA AAACTCTTTC TGGTCATAGT
GATTGGGTCA GAAGCATCAC CTACAGCCCC AATGGAAAAC AATTAGCCTC CGGTAGTGGC
GACAAAACCA TCAAAATCTG GGATGTCAGC ACTGGTCAAC CCGTAAAAAC TCTCCTTGGT
CACAAAGATA GAGTGATTAG CGTCGCCTAC AGCCCCGATG GACAACAATT AGCTTCCGCC
AGTGGTGACA CAACAATCAA AATTTGGGAT GTCAACAGTG GTCAACTTCT AAAAACTCTG
ACTGGTCATA GCAGTTGGGT GAGGAGTGTC ACCTACAGCC CTGATGGAAA ACAGTTAGCT
TCCGCCAGCG ACGACAAAAC CATCAAAATT TGGGATATCA GCAGTGGTAA ACTGCTGAAA
ACTCTCTCTG GTCATCAGGA TTCAGTCAAA AGTGTTGCCT ACAGCCCCGA TGGCAAACAG
TTAGCTGCCG CCAGTGATAA CATCAAAATT TGGGATGTCA GCAGTGGTAA GCCCTTAAAA
ACTCTGACTG GTCATAGCAA TTGGGTGAGA AGCGTCGCCT ACAGCCCCGA TGGACAACAA
TTAGCTTCCG CCAGTCGTGA CAACACAATT AAAATCTGGG ATGTCAGCAG TGGTCAAGTC
CTAAAAACTC TGACTGGTCA TAGCGATTGG GTGAGAAGCA TCATCTACAG CCCCGATGGA
AAACAGTTAG CTTCCGCCAG TGGTGACAAA ACCATCATTT TCTGGGATTT GGACTTCGAT
AATTTATTAC ACACTGGTTG TAACTTACTG AATAATTACC TGATAGCCCA TCGACAGGTT
TTAGAAGAAC TGCCATCATG CCAAACTTCT GGGCGATAG
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| Protein sequence | MTNDLVNNDR SVQQLAWAID ASVGQFKLIL ARCNYASLRD RLIKRLQEIC QAEIYVLEVQ
QSDKTLYTAI RDEFGAEILG CVMVVGLEKV QNLAVMLSSA NQVREEFRQH FHFPLVLWID
DEIYKQLIQV APDLESWAVT RNFAIDQQQL RDFITETAHQ YLHEQTKLTL HESLKLETEL
LAAQRDLFID GQIDNSELAA NLLSLLGLTN KNINKISAAL EYYHQAGSLW QKLDLIAPQE
FIFLETAFCY YIQSYKYQDI NHISWNNTRR YIQEYIDFVN QIQRADLVAK SLYKLATILR
NLKAWEQLEK LSQQALVIHQ ANNNHREIAR DYACLAEVAL AQENWRQANQ LINQALDFIS
ADKSENLLSA PELSLYRFIQ GCSQYNLGQI PQAIANLEDA INRLNPQEDV RLYLHILSYL
HNFYFTQKKY LAAYEIKQQS LSIEQQFGLR AFIGAGRLEA RKQTHLETLS TTSLQDNIAL
EIAASGRQLD VERLIERVGR PDYKLIVIHG QSGVGKSSLI NAGLVPALKK KAIGVQDNLV
VVMRVYTNWL QDLTRILIKD GGQREGEPQH SSSEPQRSPS EPQHSSSEPT VPLSSSFLSS
LLITKLRENE QHNLRTVLVF DQFEEFFFVY PELGQRKQFF EFLGECLHVL SVKVILSLRV
DYIHYLLECN DLPEFQIIGN DILSNNVLYK LGNFSPNDTK SIIQRLTANT SFNLEPNLID
ALVEDLAGEL GEVRPIELQI VGAQLQTENI TTLEKYRRFG TKQDLVQHYL NEVIHDCGEE
NQQLAEFLLY SLTDERGTRP LKTRGELERD FQQYFSTYDV ESARISPTPR QKQGKITPKT
SQQAVRKEQI LNLQQFDLVL DIFVKSGLVV LLPEKPTDRY QLVHDYLAAF IRQQQQQKLK
QVMAELDKER AQRKLSEAKL YRFLQRALFS SVAVGIGIVV LTALAVQLAN EAKKQTQNAE
ISAGINEINA LNNSSEAFFV SKQYPDALIE ALKAANKLKG TPWERENSFA TIQTAATLQR
AIYLQPNEYK ENRATEVNTL AGHENWVSSV AFAPQKRQLA SGSGDKTVKI WDINSGKTLK
TLSGHSDSVI SIAYSPDGQQ LASGSGDKTI KIWDINSGKT LKTLSGHSDS VINIAYSPNK
QQLASASDDK TVKIWDINSG KSLKTLSGHS HAVRSVTYSP DGKRLASASR DKTIKIWDIN
SGQLLKTLSG HSDGVISIAY SPDGKHLASA SSDKTIKIWD ISNGQLLKTL SSHDQPVYSI
AYSPNGQQLV SVSGDKTIKI WDVSSSQLLK TLSGHSNSVY SIAYSPDGKQ LASASGDKTI
KIWDVSISKP LKILSGHSDS VISIAYSPSE KQLASGSGDN IIKIWDVSTG QTLKTLSGHS
DWVRSITYSP NGKQLASGSG DKTIKIWDVS TGQPVKTLLG HKDRVISVAY SPDGQQLASA
SGDTTIKIWD VNSGQLLKTL TGHSSWVRSV TYSPDGKQLA SASDDKTIKI WDISSGKLLK
TLSGHQDSVK SVAYSPDGKQ LAAASDNIKI WDVSSGKPLK TLTGHSNWVR SVAYSPDGQQ
LASASRDNTI KIWDVSSGQV LKTLTGHSDW VRSIIYSPDG KQLASASGDK TIIFWDLDFD
NLLHTGCNLL NNYLIAHRQV LEELPSCQTS GR
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