Gene Ava_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1547 
Symbol 
ID3682279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1899236 
End bp1899511 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content35% 
IMG OID637716887 
Producthypothetical protein 
Protein accessionYP_322065 
Protein GI75907769 
COG category[S] Function unknown 
COG ID[COG2314] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0248034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATC TTAACCCTAC TCAAACCAAC AAACAATTAC TAGCTGGTTA CTGTGGCATT 
ATTTTTGGTG GCTTTGGTAT TCACAAATTT ATTTTGGGCT ATGCTGCCGA AGGGTTCATC
ATGTTAGTGA TCACCTTAGT TGGTGGTTCT TTTTCCTACG GAATTACTTT ATTAATTATG
CAACTGGTAG GATTAATTGA AGGCATGATC TACTTAAACA AAACCCCTGA AGAATTCGTC
AATACTTATT TAGTGAATAA ACAAAGTTGG TTTTAA
 
Protein sequence
MANLNPTQTN KQLLAGYCGI IFGGFGIHKF ILGYAAEGFI MLVITLVGGS FSYGITLLIM 
QLVGLIEGMI YLNKTPEEFV NTYLVNKQSW F