Gene Ava_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1542 
Symbol 
ID3682274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1891825 
End bp1892736 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content47% 
IMG OID637716882 
Producthypothetical protein 
Protein accessionYP_322060 
Protein GI75907764 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0507493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCATTCA CAGATGGTAA AGGTGAATTA GCCGCCTTGG TTGCTGCTGG TTTGTGGGCG 
ATCGCTTCTG TACTGTATGG GATTGTGGGG CAAAGGATTG CACCGCTACA GTTAAACTTG
ATTAAAGGAA TCGTGGCGAT CGCCTTTCTT TCCCTGACTA TTTGGTTAAC TGGCGAATCC
TTGCCTATCT CTGACCACAC ACAGATTTTG CTCCTCTGCT TGAGTGGTGT TGTTGGTATT
GCTTTGGGGG ATACGGCTTT TCTAGCTGCA ATCAATTACT TAGGGGCGCG TCGTGTGTTA
CTTATCGGCA CTTTAGCTCC TCCCATAACA GCGATCGCCG CAAATCTTGT CCTCCAAGAA
CAGTTAAATT TCCGCGCTTG GTGTGGAATT TTACTCACTA TTATGGGGGT GGCTTGGGTA
GTTACAGAAC GGGTTCCCGA TACAGGAGGT AAGAGGGTAG AGGATAGTCT TTTGATGCGG
GGTCTTGGCT TTGCTTTACT CGCAGCAATG ACTAATGCCG CCGGTACAGT CATCTCTCGT
GCCGCATTTG CTATTGGTAA CGTTACACCT TTGTGGGCGG CTTTACTGCG ATTATCTGCG
GCTGAGTTAA TTTTGGTGGT AGGGATATGG TTGAGCTACA AACGTCAAAT GTCGTCCTAC
TTTTACAGAG AATCGTGGCG GGTTATATTG ATTAGTTGCT TCGCTTCCTT TTGCGGCACA
TATTTAGGAA TTTGGCTACA ACAAACAGCA ATTAAACTCA CAGCTGCGGG AGTTGCTTCC
ACCTTGATGC AAACTAGTCC ACTATTCGTT ATCCCCCTGT CCCTATGTCT CGGTGAAAAA
GTGAGTTGGC GATCGCTCGC TGGGGTAATC ATTGCGATCG CAGGTATTGG ATTATTGTTT
TATCTCAAGT AA
 
Protein sequence
MPFTDGKGEL AALVAAGLWA IASVLYGIVG QRIAPLQLNL IKGIVAIAFL SLTIWLTGES 
LPISDHTQIL LLCLSGVVGI ALGDTAFLAA INYLGARRVL LIGTLAPPIT AIAANLVLQE
QLNFRAWCGI LLTIMGVAWV VTERVPDTGG KRVEDSLLMR GLGFALLAAM TNAAGTVISR
AAFAIGNVTP LWAALLRLSA AELILVVGIW LSYKRQMSSY FYRESWRVIL ISCFASFCGT
YLGIWLQQTA IKLTAAGVAS TLMQTSPLFV IPLSLCLGEK VSWRSLAGVI IAIAGIGLLF
YLK