Gene Ava_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1513 
Symbol 
ID3682479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1862186 
End bp1863094 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content44% 
IMG OID637716853 
Producthypothetical protein 
Protein accessionYP_322031 
Protein GI75907735 
COG category[S] Function unknown 
COG ID[COG2324] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0146288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAA TTGTTATTGC AGAGCGGATA TGCCTTATTG GTCATATCGT CTCGATGTTT 
TTTGGACTAG TAGGGATACT ACTAGTTGTA CCTAATGCCG AGGTGCTGTT CCATCTATCT
GAGTTTGGAC AGACAGCCAT GCAGTGGAGT ATGGCTGGTG GTGGTGTAGT TTACATGATT
TTGGGGGCAG CGGCCGTATT TTTATATGCC CTGCGAACAT TAGGGTTAGG TCGTACCTTG
GGTTTTATGC TACCTGCTGT ACTCATCTCC TTAACTAGTG AACTGTTAGG AACCAGCACA
GGGTTTCCTT TTGGTCACTA CAGTTATTTA AGTGGCTTGG GCTATAAAAT TGCTGGTTTA
GTACCGTTCA CAATTCCCTT GTCATGGTTT TATGTAGGAT GTTCCTCATA CCTGTTGGGG
CGTGCTGGTT TAGAAGTAGA TAAAAAACCC ACTTTGTTAC GCCATATCGG TGCTATTAGC
TTGGGTTCAT TACTACTCAC CTCATGGGAT TTTGTACTTG ACCCTGCCAT GAGCCAAACT
TCACTACCTT TCTGGTATTG GCAACAACCA GGCCCTTTCT TTGGAATGCC CTATCAGAAC
TTTGCTGGTT GGTTAGGTAC AGGTGCAGTA TTCATGACAG TGGCTGCTGT ATTGTGGAGA
AATAATCCGA TCAAATTTGA GCGATCGCAG CTTAATGTAC CTTTAATAGT TTATTTAGGT
AACTTTGGTT TTGCTACCGT TATGAGCTTG GCAGCAGGCT TCTCTATCCC TGTATTGTTA
GGCGTAGTGT TAGGTGTAGC CCCAGCGCTA GCTTTATGGT GGAAAGGCTC ATCTGCATCA
AACCTGATCA GCGTAGAAAC ATCTACGACA GAAGTCTCCA TAGCCAGCAG CATTAAAGCT
GTGAATTAG
 
Protein sequence
MKQIVIAERI CLIGHIVSMF FGLVGILLVV PNAEVLFHLS EFGQTAMQWS MAGGGVVYMI 
LGAAAVFLYA LRTLGLGRTL GFMLPAVLIS LTSELLGTST GFPFGHYSYL SGLGYKIAGL
VPFTIPLSWF YVGCSSYLLG RAGLEVDKKP TLLRHIGAIS LGSLLLTSWD FVLDPAMSQT
SLPFWYWQQP GPFFGMPYQN FAGWLGTGAV FMTVAAVLWR NNPIKFERSQ LNVPLIVYLG
NFGFATVMSL AAGFSIPVLL GVVLGVAPAL ALWWKGSSAS NLISVETSTT EVSIASSIKA
VN