Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1513 |
Symbol | |
ID | 3682479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1862186 |
End bp | 1863094 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637716853 |
Product | hypothetical protein |
Protein accession | YP_322031 |
Protein GI | 75907735 |
COG category | [S] Function unknown |
COG ID | [COG2324] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0146288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACAAA TTGTTATTGC AGAGCGGATA TGCCTTATTG GTCATATCGT CTCGATGTTT TTTGGACTAG TAGGGATACT ACTAGTTGTA CCTAATGCCG AGGTGCTGTT CCATCTATCT GAGTTTGGAC AGACAGCCAT GCAGTGGAGT ATGGCTGGTG GTGGTGTAGT TTACATGATT TTGGGGGCAG CGGCCGTATT TTTATATGCC CTGCGAACAT TAGGGTTAGG TCGTACCTTG GGTTTTATGC TACCTGCTGT ACTCATCTCC TTAACTAGTG AACTGTTAGG AACCAGCACA GGGTTTCCTT TTGGTCACTA CAGTTATTTA AGTGGCTTGG GCTATAAAAT TGCTGGTTTA GTACCGTTCA CAATTCCCTT GTCATGGTTT TATGTAGGAT GTTCCTCATA CCTGTTGGGG CGTGCTGGTT TAGAAGTAGA TAAAAAACCC ACTTTGTTAC GCCATATCGG TGCTATTAGC TTGGGTTCAT TACTACTCAC CTCATGGGAT TTTGTACTTG ACCCTGCCAT GAGCCAAACT TCACTACCTT TCTGGTATTG GCAACAACCA GGCCCTTTCT TTGGAATGCC CTATCAGAAC TTTGCTGGTT GGTTAGGTAC AGGTGCAGTA TTCATGACAG TGGCTGCTGT ATTGTGGAGA AATAATCCGA TCAAATTTGA GCGATCGCAG CTTAATGTAC CTTTAATAGT TTATTTAGGT AACTTTGGTT TTGCTACCGT TATGAGCTTG GCAGCAGGCT TCTCTATCCC TGTATTGTTA GGCGTAGTGT TAGGTGTAGC CCCAGCGCTA GCTTTATGGT GGAAAGGCTC ATCTGCATCA AACCTGATCA GCGTAGAAAC ATCTACGACA GAAGTCTCCA TAGCCAGCAG CATTAAAGCT GTGAATTAG
|
Protein sequence | MKQIVIAERI CLIGHIVSMF FGLVGILLVV PNAEVLFHLS EFGQTAMQWS MAGGGVVYMI LGAAAVFLYA LRTLGLGRTL GFMLPAVLIS LTSELLGTST GFPFGHYSYL SGLGYKIAGL VPFTIPLSWF YVGCSSYLLG RAGLEVDKKP TLLRHIGAIS LGSLLLTSWD FVLDPAMSQT SLPFWYWQQP GPFFGMPYQN FAGWLGTGAV FMTVAAVLWR NNPIKFERSQ LNVPLIVYLG NFGFATVMSL AAGFSIPVLL GVVLGVAPAL ALWWKGSSAS NLISVETSTT EVSIASSIKA VN
|
| |