| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1469 |
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| Symbol | |
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| ID | 3682512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1813539 |
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| End bp | 1814510 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637716808 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_321987 |
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| Protein GI | 75907691 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR02749] solanesyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.793711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.386574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAG CCACCTCCCT GTTTACCCCT GTGGAAGCAG ACCTGCGAAT ACTAGCAGAT
AACCTGAAAC AGCTAGTTGG AAATCGCCAC CCCATTTTGT TTGCGGCAGC CGAACATTTA
TTCGGAGCTG GGGGAAAGCG TATCAGACCA GCAATCGTGC TGCTGATATC AAGAGCAACA
ATGTTAGAGC AAGATATTAC GCCGCGTCAC CGACGGCTAG CCGAGATTAC AGAAATGATT
CATACGGCCA GCTTAGTACA CGACGACGTG GTCGATGAAT CTGAAGTACG GCGAGGTGTA
CCCACCGTTC ACAGTTTGTT TGGCAATCGA ATTGCCATCC TAGCAGGAGA TTTCTTATTT
GCTCAATCTT CCTGGTATTT AGCAAACTTG GACAATTTAC AGGTGGTGAA ACTTCTCTCA
GAAGTCATTA TGGATTTGGC TACTGGGGAA ATTCAGCAGG GACTAAACCG CTTTGACGCG
AGTATTTCCA TCGAGAATTA TATCGAGAAG AGCTACTACA AGACAGCTTC CTTAATTGCT
AACAGTTCCA AAGCTGCTGG TTTATTGAGC GAAGTTTCCC CAGAAACTGC CGAACATCTC
TACGCCTATG GTCGTCACTT GGGCATAGCA TTTCAGATTG TCGATGACAT TTTAGATTTC
ACCAGCACCA CAGACACTCT TGGTAAACCG GCTGGGTCTG ATCTCAAAAG TGGCAATCTC
ACCGCACCGG TTTTATTTGC TCTAGCGGAA AAACCATACT TAGAAGTGCT GATTGAACGA
GAGTTTGCCC AAGAAGGAGA TTTAGAGCAA GCACTAGAAC TCATCCAAAA TAGTCAAGGC
ATACAGAAAG CACGAGATTT AGCTGCTCAT CACACCAAGT TAGCAATTGA GCATCTAACG
ACACTGCCAA CTTCGGAATC TCACCAAGCA CTAATCAACA TAGCTGAATA CACACTAAGC
CGATTATATT AG
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| Protein sequence | MTPATSLFTP VEADLRILAD NLKQLVGNRH PILFAAAEHL FGAGGKRIRP AIVLLISRAT
MLEQDITPRH RRLAEITEMI HTASLVHDDV VDESEVRRGV PTVHSLFGNR IAILAGDFLF
AQSSWYLANL DNLQVVKLLS EVIMDLATGE IQQGLNRFDA SISIENYIEK SYYKTASLIA
NSSKAAGLLS EVSPETAEHL YAYGRHLGIA FQIVDDILDF TSTTDTLGKP AGSDLKSGNL
TAPVLFALAE KPYLEVLIER EFAQEGDLEQ ALELIQNSQG IQKARDLAAH HTKLAIEHLT
TLPTSESHQA LINIAEYTLS RLY
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