Gene Ava_1464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1464 
Symbol 
ID3682546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1804930 
End bp1806387 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content46% 
IMG OID637716803 
ProductSodium/hydrogen exchanger 
Protein accessionYP_321982 
Protein GI75907686 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000329156 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00284815 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGTTTT TCAATGCAAT CAACTTCGCT TTTCCTCTGC TGGCCAGTAC AACTGAAGCC 
GCAGACAGTT CGATGGTTGT CGCCGCAGTC TTGCTAAGTT TAGTGGTAGT TTACCTAGCT
AGCAAAGTTG GTGGCGAGTT ATCCAACCGA GTGGGTTTAC CACCTGTCTT AGGCGAACTT
TTAGGTGGTG TAGTAGTGGG TGTTTCTGTC CTGCACCTGT TGGTGTTCCC TGGAGGTGGT
GCAGACGGTT CCAGTTCTAT GATTATGACC TTCCTCCAAA CAACGGCTGG TTTAAGTCCA
GAAGCGACAC CAGCCGTCTT TACAGCCCAA TCAGAGGTAA TTTCTGTTTT GGCTGAACTG
GGTGTGATCA TCCTACTGTT TGAAATCGGC TTAGAGTCAA ACTTAAAAGA CTTGATGGCG
GTTGGTGTCC AAGCTTTAGT CGTTGCAGTG GTGGGGGTTA CAGTCCCATT TGCCGCCGGA
ACTATAGGCT TGATGACCTT ATTTGGCATC GATGCTGTAC CCGCAATCTT TGCTGGGGCA
GCTTTAACGG CTACCAGTAT TGGTATTACC TCTAAGGTAC TCTCAGAATT AGGAAGGCTC
AATTCCAAAG AAGGACAGAT AATTTTAGGT GCGGCTGTAA TTGACGATGT ACTGGGAATT
ATTGTCTTAG CTGTAGTTGC CAGCCTCGCT AAAGAAGGCA CAGTAGATGT AGGTCAAGTC
ATCTATCTGA TTATTAGTGC CAGTGGCTTT CTTTTGGGCG CGATTGTCTT GGGTAATGTT
TTCAATAAAA CCTTTGTCGC GATCGCTGAT ATGCTCAAAA CACGGGGTGA ACTAGTAATC
CCAGCTTTCA TCTTTGCTTT TGTCATGGCA TACCTCGCTG CCATCATCCA TTTAGAAGCC
ATTCTTGGCG CTTTTGCCGC AGGTTTAGTT CTGGAAGAAA CAGACAAGCG CAAAGAACTA
CAAAGGCAAG TCTGCCCCAT TGCTGATATG TTAGTGCCAA TTTTCTTCGT TACCGTAGGC
GCAAAAACTG ATTTAGGCGT ACTTAACCCA GCCATCCCCA GCAATCGGGA AGGGTTAATT
ATGGCAAGTT TCCTGATCAT GGTCGCCATC TTCGGTAAAG TAATCACAGG CTTTAGCGTC
TTTGGTCAAT CCCAAATCAA CCGCCTAGCC ATTGGCGTAG GGATGATTCC CAGAGGTGAG
GTAGGGTTAG TATTTGCTGG TGTCGGTGCA GCCAGTGGCG CACTCTCTAA ACCGTTAGGG
GCAGCAATTA TTATGATGGT GATCCTGACA ACCTTTCTCG CCCCCCCTTT ATTAAGATTC
GTTTTTCCAG ACTCAGACGA TGGTATAGAC GACTCAGCAC CATTGATTTT AGATGGTTCC
CCAGGGAAAG AATTAGCGAT AGAAACACCA TCATCTGTTG TATCTACTGC CAAAGATAGT
GGGAATGTAA GTTCTTAA
 
Protein sequence
MQFFNAINFA FPLLASTTEA ADSSMVVAAV LLSLVVVYLA SKVGGELSNR VGLPPVLGEL 
LGGVVVGVSV LHLLVFPGGG ADGSSSMIMT FLQTTAGLSP EATPAVFTAQ SEVISVLAEL
GVIILLFEIG LESNLKDLMA VGVQALVVAV VGVTVPFAAG TIGLMTLFGI DAVPAIFAGA
ALTATSIGIT SKVLSELGRL NSKEGQIILG AAVIDDVLGI IVLAVVASLA KEGTVDVGQV
IYLIISASGF LLGAIVLGNV FNKTFVAIAD MLKTRGELVI PAFIFAFVMA YLAAIIHLEA
ILGAFAAGLV LEETDKRKEL QRQVCPIADM LVPIFFVTVG AKTDLGVLNP AIPSNREGLI
MASFLIMVAI FGKVITGFSV FGQSQINRLA IGVGMIPRGE VGLVFAGVGA ASGALSKPLG
AAIIMMVILT TFLAPPLLRF VFPDSDDGID DSAPLILDGS PGKELAIETP SSVVSTAKDS
GNVSS