Gene Ava_1451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1451 
Symbol 
ID3682533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1793291 
End bp1794067 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content39% 
IMG OID637716790 
Producthypothetical protein 
Protein accessionYP_321969 
Protein GI75907673 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.245884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0167299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAT ATTGGCGTGA AACCATCGCA GTTACCAAAC GTATTTTAAT TGAACTGTTA 
CGCCGTAGAC GCAGTTTGAT TTTTTGGAGT ATCTTCCCGA TTTCGGTACT GACTTTGAGT
GGTTTTATAT TAGCAGAACG GGCGGAACTA CCCCTAGCTG ATGCTTTTTC CTATGCTGCA
CCTTCAACTT TAGTGGGTGC TGCACTGTTC TTTAGTTGCT TGGGCGGTAC TGTGTCTACT
GTAGTAGCAG AAAGAGAACA ACAAACCCTC AAACGTCTTT TTCTGTCTCC CTTGAGTGGT
TTATCTTATT TTTTGGGGAT TTTCCTGGCC CATAGTTGCA TTGGTATTGG TCAGGCTTTA
TTAATTTATG CGATCGCTGC TTTTTGGGGC GCAACTTTTA AAGGTTCAAT TTTATTAGGA
TTGGGAATTA TTTTTCTGAG TATTGCTGCT TACGTTGGTT TGGGTTTTAT TCTCGGTACA
CAATTAGCCA GGCGGATTGA AGATGTCAAT TCTTTGGTAG CCGCCTTTGG CGTTCCTTTA
TTAATTCTGG GTGGGGCATT TTTACCGACT GCATTGTTTC CTAAAACCCT GATCAATATA
GCTAAATATA ATCCCATTTA TCATATGAAT GAAGCTTTAG TTGCTGTATC TTCAAAAGGG
GAACCAGTTG ATAAAATAGC TTCACACATT ACTTTTTTAT TAGCATTCGC TATAGCGATG
ATTATTGGTG GTTGGTTATC GTATCAACGA ATGTTAATTG TAGAGAGAAG ATTATAA
 
Protein sequence
MMKYWRETIA VTKRILIELL RRRRSLIFWS IFPISVLTLS GFILAERAEL PLADAFSYAA 
PSTLVGAALF FSCLGGTVST VVAEREQQTL KRLFLSPLSG LSYFLGIFLA HSCIGIGQAL
LIYAIAAFWG ATFKGSILLG LGIIFLSIAA YVGLGFILGT QLARRIEDVN SLVAAFGVPL
LILGGAFLPT ALFPKTLINI AKYNPIYHMN EALVAVSSKG EPVDKIASHI TFLLAFAIAM
IIGGWLSYQR MLIVERRL