Gene Ava_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1356 
Symbol 
ID3682865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1672162 
End bp1673640 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content41% 
IMG OID637716694 
ProductNB-ARC 
Protein accessionYP_321875 
Protein GI75907579 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000010026 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0147503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAACT CGCTCAAAGC ATCAACAACT GGACTGGGAA TTGTAGACAA GGCGCGAAAA 
CGTCTTGGCT GGACGAAAAC TAGTACTGCG TGTTGGTGGC AAGATGCTCA CACTTCTAGA
GCTACTTTAC GGCGATTTTG GCAGGGTGAT CGCATTCAGC AAGAAATTTT CATCGCTATC
TGTCAAGCTG TTGGGATTAA CGATTGGCAA AATATCGCAG AAATCCCTAA CGCAGACTTT
GAGGAAACCT CTACACAATA CCTCGACTGG GATGATGCAC CTGATCTTGA AAGTTTTTAT
GGACGTAATC AAGAATTAGC CCAGTTAGAA GAATGGATTT TAGGCGATCG CTGTAAACTA
ATCATCATCA CAGGGATTGC TGGCATTGGT AAAACGGCTC TGGCACTGGC TTTAGCTGAT
TTGCTTCAGT TAAAATTTGA TGGTTTAATC TGGAAAACCC TTCATTCTGT GCCATCCCTA
GTTCCCCTGT TAGATGGACT TCTCCACACC TTTAAGCAAA CTCCGGTTGA TGATATTCCC
TCAGATACCG CAAAACTCAT CCACCATCTG CAACAGCGTC GGTGTTTGTT GATTCTGGAT
GGGTTGGATG AGTCAGAGAA ACACTATCAT CAATTTATCC AGCAATTAAG CCGCGCTCAT
CATCAAAGTT GCATTATCCT CACCAGTCGA GAACAACCAA ATATTATTGA ATCGAATACT
AAAACTGTTC GCAGTCTCAC GTTAACGGGA TTACCAAAAG ACGATGCGGT GAAACTATTG
CAAGCCAGAG GATTCACAGG TAAAGAAATC GGATTATCAC CCCTAATTCA ACTTTATCGC
GGCAATCCGT TGGCACTCAA ACTAGTTACG CCGTTGATTC AGTCGGTGTT TGGTGGGAAT
ATTGCGGCTT TTCTGAGTCA AAATACGATA GTAATTGGCG ATCGCTTACG TGCTATTCTC
AAGCAACAGT TTGAGCAACT GAGCGATTTA GAACAAAATA TTCTCTATTG GTTAGCAATT
TGGCAACAAC CAATCTCTTT TAGCCGATTG CAAACTCATT TACTGATTTC TCTTGACCCA
GCTACAGTTT TAGATGCTAT TGTCAGCTTA GAAAGGCGAT CGCTTTTAGA AAAATGGATT
TGTAGTGATG CACCAGCTTT TACCTTACAA CCACTGGTGA TGAAAATTGC CACCGATGAA
TTAGTAGAAC GTGCAACTCA AGAGATAATT CAGGTGATGC AGAGTCGAGA TATCGCTGAT
TTTAAAGTTC TGCGAACCCA TTGGTTATTG CGTCCGGGTA GTGATGATAT TGTAGGCGAT
CGCATTTTGC ATCAACTACA AGAAAAACTT TGGCAGATTT ATGGGGCAAA TCTCGTACAG
AATCTCCAGC AAATTCTATT ACTTTTAAAT GATAAATCAC CTTTAACAAT TGGTTATATT
GCTTGCAATA TCACAACAAT TATAACAAAA GGGGTGTAG
 
Protein sequence
MSNSLKASTT GLGIVDKARK RLGWTKTSTA CWWQDAHTSR ATLRRFWQGD RIQQEIFIAI 
CQAVGINDWQ NIAEIPNADF EETSTQYLDW DDAPDLESFY GRNQELAQLE EWILGDRCKL
IIITGIAGIG KTALALALAD LLQLKFDGLI WKTLHSVPSL VPLLDGLLHT FKQTPVDDIP
SDTAKLIHHL QQRRCLLILD GLDESEKHYH QFIQQLSRAH HQSCIILTSR EQPNIIESNT
KTVRSLTLTG LPKDDAVKLL QARGFTGKEI GLSPLIQLYR GNPLALKLVT PLIQSVFGGN
IAAFLSQNTI VIGDRLRAIL KQQFEQLSDL EQNILYWLAI WQQPISFSRL QTHLLISLDP
ATVLDAIVSL ERRSLLEKWI CSDAPAFTLQ PLVMKIATDE LVERATQEII QVMQSRDIAD
FKVLRTHWLL RPGSDDIVGD RILHQLQEKL WQIYGANLVQ NLQQILLLLN DKSPLTIGYI
ACNITTIITK GV