Gene Ava_1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1354 
Symbol 
ID3682863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1671335 
End bp1671823 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content40% 
IMG OID637716692 
Producthypothetical protein 
Protein accessionYP_321873 
Protein GI75907577 
COG category[R] General function prediction only 
COG ID[COG2405] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000200995 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0118722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTG TCAGCGATAC CTCACCGATC AACAATCTTG CAGCCATCAA TCACCTGAAC 
TTACTGCAAC AACTATATGA TACTGTGATT ATTCCGGAAA CAGTTTACCA AGAACTAACT
GATCCTGAAT TTCCCGTAGC AGGTGCAACT GAAGTAAAAA CTTTTGACTG GATTCAAACT
CGTCAAGTGA GCGATCGCAA TGTTGTAGAA GCATTGGCAA ATGACTTAGA TAAAGGTGAA
GCTGAAGCAA TCGCTTTGGC ACTAGAAATC AAAGCGGATC AACTTTTGAT TGATGAACGT
CGTGGTCGTT TGATTGCTGA TAGACTGCAA CTTCGATATG TAGGGATTTT AGGCATTTTA
GTTGAAGCGA AAAGTCGAGG ACTGATTTCG ACAGTCAAAC CCTTAATGGA TGCTTTGCGT
AATCAAGCAG GGTTTTGGAT TGATGCAGCT TTATACAATC GAGTTTTACA GCTTGTTGGT
GAGGATTAA
 
Protein sequence
MIIVSDTSPI NNLAAINHLN LLQQLYDTVI IPETVYQELT DPEFPVAGAT EVKTFDWIQT 
RQVSDRNVVE ALANDLDKGE AEAIALALEI KADQLLIDER RGRLIADRLQ LRYVGILGIL
VEAKSRGLIS TVKPLMDALR NQAGFWIDAA LYNRVLQLVG ED