| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1325 |
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| Symbol | |
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| ID | 3682971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1626204 |
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| End bp | 1629452 |
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| Gene Length | 3249 bp |
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| Protein Length | 1082 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637716663 |
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| Product | SNF2-related helicase |
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| Protein accession | YP_321844 |
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| Protein GI | 75907548 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTTG TTACTGGGCA AATTGTGCGG GTGCGATCGC GGCAGTATCT TGTAGAAGAT
GTAGTGGCTA AACCTTTGGT GAAGGAAGAC ACTTTAGTTT GCCTTTCGTG TTTAGAAGAT
GATGCGTTAG GTGAACAGTT AGAAGTTCTT TGGGAAAGAG AAGTTGATGC CAAAGTCATA
GGTAAAACTT CGTGGGAGTC CATAGCAAAC CGAGGTTTTG ACAATCCCCG TCTATTTTCG
GCTTATCTCC ATACTCTGCG CTGGAATTGT GTTACCTCAA CTGACCCAAA ACTGTTTCAA
GCACCATACC GTGCAGGTAT TGAAGTCAAA GCTTACCAGC TTGAACCGCT ACGTAAAGCT
TTATTAATGC CTAGAGTTGC TTTGTTTATT GCTGACGATG TTGGTTTAGG GAAAACCATA
GAAGCAGGTC TGATTTTAAG AGAAATGTTG ATGCGGCAAA AAGTTCGCCG TGTTTTGATT
TCCTGTCCGC CGTCGGTTGT ACGGCAATGG CAAGAAGAAA TGGAAAGCCG CTTCGGGCTA
ACTTTTGTAA TTTTTGACCG TGAGTTTGTA GCTAGTCGTC GTCAAGAACG CGGTTATGGA
ATTAACCCTT GGACAACTCA CAGCCGCTTC ATTATTTCTC ATGCTTTGTT ACGTGATGAA
ACCTATGCTG CTCCTTTGCG TGATTGGTTG GGAGATTTTA CAGGCGCATC AATGCTGATT
CTTGATGAAG CACACAACGC AGCCCCAGCT AGTGGTGCGA AGTATGCTGT AGATTCTCAG
TTAACACGTA CTGTCCGCGA TATAGCACCA CGGTTTGAAC ATAAGCTGTT TCTTTCTGCT
ACGCCTCATA ATGGTCATTC CAATAGTTTT GCAGCTTTAT TAGAAATCCT CGACCCGCAA
CGGTTTTGTC GAGGTGTCCC TGTGCGAGAT AGCAAACTTT TAGATACAGT GATGGTGCGG
CGATTAAAAC AAGATTTACG GGAGATTGGC GAAGAGTTTC CCGAACGACG GGTTATTCCT
ATCGTCATCG ATAACCTTCC AGAAGATGCG CCGGAGTTGA AACTGTCGCG GTTGCTGCAA
GAATACCGCA GTCTAAGGGA AGAACGGCTC AAGGAAGCAT CGAAGTCAAC TCAAAATGCG
GCGATGCTGG TAATAACTTC GCTGCAAAAG CGTCTGCTAT CTTCCATTGA AGCTTTTGCA
CGCACTTTAA AAGTTCATCG GGCGGCAATT GAAAAGCAAT CTGTTAACCG TTCTGCAAAC
GCCATAGAAA ATTTACCGTT GCTATTAGAA CCCCCTGGTG CTGACGATGA ACGGGCTGAA
CTAGCAGAAG AAGAAGTACA AGCAGAAGAA GATACTCAGG TAATGGTGGC TACTGGGCAG
GCTGCAAGCT TTGGGTTAAG CAGCCGGGAA TTGGAAATTT TAGAAGAGAT GACCGATGTA
GCCAACCAAG CTAGATATCA AGCAGACCCA CGAGTTGAAA AATTAGTGGC ATGGATTAAA
CAAAATCTCT GTCCTGATTT GGGTAAACCT AATGCTGCTT GGTTAGAGAA GCGAGTCATT
ATATTTACTG AATATACAGA TACAAAACGC TACTTACAGC AAAAACTTCA GGAAGCCATT
GCAGGTTCAG ATAAAGAACG CGATAGCGAA GCGCTACGGC GAAACGCCGA ACGCATTGAT
GTATTTCATG GTGGTATTGG CGAAGAACGC CGGGAAGCTA TCAAAAATGC CTTCAATGCT
GACCCATTGC GTCACCCCCT CCGCATTCTC ATAGCCACGG ATGCAGCAAG GGAAGGGGTA
AACCTGCAAA ACAATTGTGC TGACCTATTC CATTTTGATG TGCCTTGGAA CCCGTCGAGG
ATGGAACAGC GCAACGGGCG TATTGACAGA AAATTACAGC GATCGCCTAT TGTTCACTGC
TACTACTTTG TTTTAGCGCA ACGGACAGAG GACAAAGTAT TGAAAGTGCT GGTGAAGAAG
ACCGAAACAA TTCAAAAAGA ATTGGGGACG CTTTCGCCAG TGGTGCAGAA AAATTTATCG
CGTCTGCTGG AAGGTGGTAT TCGCCACAAT CAGCTAACTA ATATTACTGC TTCCATAGAA
CAAGCTGATT TACCTAATTT ACAGATAGTA AATGAGGAAT TGGAAGAAAA TCGACTGCGG
AGAGAAGAAT TAACCAAGCA ATTATCCCAG TTGCAAGAGA TGTTGAAAAC ATCGCGGGAT
TGGTTGGGAC TGAGTGATGA ACACTTCCGC AATGCTATTT CCGCTTCTTT AGAAATTCTC
GGCGCGACTC CTCTGACTCC AGTCAATAGC AATGAAGCTT GTCAAGATTC GGCTACTGCA
CGCTGGACGC TTCCACCCCT TGACCAACGC GCAGACCCGA CATGGGCGAA TACTCTTGAT
ACCTTAAGAC CGCCACGCAA GAAAGGACAA AAGCCTTGGG AATGGCGACG GGAAGCAGCG
ATTCGTCCGG TAGTATTTCG TGACCCTGGT TCATTGGATG GGGATGTAGT TCACCTGCAT
TTAGAACATC GGGTGGTACA GCGTCTTTTA GGGCGATTTT TAGCCCAAGG GTTTTTACAT
GATGAGTTAA CCCGCGCTTG CGTTTGCCTA ACTGATGACC CAATTCCGAA AGTTCTCGCC
TTGGGACGGT TATCTGTTTA CGGACAGGGT GCGTCGCGGC TGCATGACGA AGTAATTGCG
ATCGCGGCGG AATGGTCAGA CCCAGCCGCG AGGGGACGCA AGAAACTACA ACCGTTAAAC
GAAGGGGAGA AAGACAACGT ACTGGCTTTA TTGGAAGATT CTTTAGCTTC TCCTCGTTTG
CAAAAAGCAT CCCAGACTGT TAAGGAACTG CTAAAGCAGA ATGCTACTCA AGATATTGCT
GATTTGATTC CCCATTTAGA ACGTCGTGCC AATATTTTGG CGCAAAGGGC TGAGAAAAAG
TTAACCGAAC GGGGCAAAAA AGAAGCTGTA GAGATGAAAA AAATTCTCGA ACAGCAGCAG
CAGCGTATTA GCCAACGTAA GCAGGAAATT GAAAATACCA AAGCTATCCA GCTATCAATT
CCATTTGCAG AGTTCCCTGT CGAGGAAAAA CGGCAGTTAG AAGCAGACCG TCGCCACTGG
GAGAAGCGAT TGAAAGACCT GGCTGAAGAA ATTATTTCTG AACCTGCCCG AATTGAGGCT
TCCTACGAAG TTAGGGCGGT GCGAGTTGAA CCTGTGGGGT TGATTTATTT ATGGCCAGTT
TCGGGTTGA
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| Protein sequence | MSVVTGQIVR VRSRQYLVED VVAKPLVKED TLVCLSCLED DALGEQLEVL WEREVDAKVI
GKTSWESIAN RGFDNPRLFS AYLHTLRWNC VTSTDPKLFQ APYRAGIEVK AYQLEPLRKA
LLMPRVALFI ADDVGLGKTI EAGLILREML MRQKVRRVLI SCPPSVVRQW QEEMESRFGL
TFVIFDREFV ASRRQERGYG INPWTTHSRF IISHALLRDE TYAAPLRDWL GDFTGASMLI
LDEAHNAAPA SGAKYAVDSQ LTRTVRDIAP RFEHKLFLSA TPHNGHSNSF AALLEILDPQ
RFCRGVPVRD SKLLDTVMVR RLKQDLREIG EEFPERRVIP IVIDNLPEDA PELKLSRLLQ
EYRSLREERL KEASKSTQNA AMLVITSLQK RLLSSIEAFA RTLKVHRAAI EKQSVNRSAN
AIENLPLLLE PPGADDERAE LAEEEVQAEE DTQVMVATGQ AASFGLSSRE LEILEEMTDV
ANQARYQADP RVEKLVAWIK QNLCPDLGKP NAAWLEKRVI IFTEYTDTKR YLQQKLQEAI
AGSDKERDSE ALRRNAERID VFHGGIGEER REAIKNAFNA DPLRHPLRIL IATDAAREGV
NLQNNCADLF HFDVPWNPSR MEQRNGRIDR KLQRSPIVHC YYFVLAQRTE DKVLKVLVKK
TETIQKELGT LSPVVQKNLS RLLEGGIRHN QLTNITASIE QADLPNLQIV NEELEENRLR
REELTKQLSQ LQEMLKTSRD WLGLSDEHFR NAISASLEIL GATPLTPVNS NEACQDSATA
RWTLPPLDQR ADPTWANTLD TLRPPRKKGQ KPWEWRREAA IRPVVFRDPG SLDGDVVHLH
LEHRVVQRLL GRFLAQGFLH DELTRACVCL TDDPIPKVLA LGRLSVYGQG ASRLHDEVIA
IAAEWSDPAA RGRKKLQPLN EGEKDNVLAL LEDSLASPRL QKASQTVKEL LKQNATQDIA
DLIPHLERRA NILAQRAEKK LTERGKKEAV EMKKILEQQQ QRISQRKQEI ENTKAIQLSI
PFAEFPVEEK RQLEADRRHW EKRLKDLAEE IISEPARIEA SYEVRAVRVE PVGLIYLWPV
SG
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