Gene Ava_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1269 
Symbol 
ID3683168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1559086 
End bp1559670 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content42% 
IMG OID637716607 
ProductPAP fibrillin 
Protein accessionYP_321788 
Protein GI75907492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.244776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAA AAACAGCTTT ATTAGATGCG ATCGCCGGGA CTAATCGCGG TTTATTGGCT 
AGTGAACAGC AGAAACGGGC TATCTTAGCA GCGATCGCTA CATTAGAAGA CCTCAATCCT
ACACCGCGTC CAGTAGAAAA TGCCAATCTG CTAGACGGCA ATTGGCGACT ACTATACACC
ACCAGTAAAG CTCTTTTAAA CTTAGATCGC GTACCTGTAT ATAAACTTGG ACAAATTTAT
CAGTGTATTC GGGTAGAAAC TACCAGCGTT TACAACATAG CAGAGATTTA TGGCTTACCT
TATCTCGAAG GATTAGTTAG CGTAGCTGCC AAATTTGAGC CAGTTTCAGA ACGGCGTGTT
CAAGTGAAAT TCCAACGTTC CATCGTTGGT TTACAACGAT TAATCGGGTA CACTTCCCCA
GAAGACTTTA TCCAACGAAT TGAAGCTGGT AAAAAGTTCA CTGCCCTAGA CATACTTATA
AAAAGTGATA CACAGCAGGG ATGGTTAGAT ATCACCTACA TAGATCACAA CTTACGCATT
GGCAGGGGTA ACGAGGGTAG CGTGTTTGTT TTAAGTAAAA CATAA
 
Protein sequence
MLKKTALLDA IAGTNRGLLA SEQQKRAILA AIATLEDLNP TPRPVENANL LDGNWRLLYT 
TSKALLNLDR VPVYKLGQIY QCIRVETTSV YNIAEIYGLP YLEGLVSVAA KFEPVSERRV
QVKFQRSIVG LQRLIGYTSP EDFIQRIEAG KKFTALDILI KSDTQQGWLD ITYIDHNLRI
GRGNEGSVFV LSKT