Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1231 |
Symbol | |
ID | 3683271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1516831 |
End bp | 1517700 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637716569 |
Product | TetR family transcriptional regulator |
Protein accession | YP_321750 |
Protein GI | 75907454 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00074883 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGA AAAAGGCACA TATAGAAACT AATCATGCCG ACCGCTTGCC GTCAGCAGAA AAGGTTGATG CAATTCTCAA CGGTGCGATG CAAGAATTTT TGACCCACGG ATATGCAGCT ACAACAATGG ATAGAGTGAC AGCCGCAGCC GGAGTCTCGA AAACCACTGT CTACAGCTAC TTTCAAGACA AAGAAGGATT ATTTGCTGCT TTGATTGAAA AACTAGCCCA GGAAAAATGT TTTTTAATGC ACAATCCTGA GCTTTTGCAA GGAGAACCCC ATATTGTTCT ACGCCGTTTA GCAACAAATA TTTTCAATCA AGTAGAGCAA GAACCAGAGT TTTTGAGTTT AGTCAGGCTA ATTATCGGCG AATCTGGGCG GTTTCCATCC TTAGCAAAAA CCTTTGTCTG CAACATAGAT AAACAAGCTC TACAGAGGCT AAGTGAATAT TTTACAGAGC ATTCAGAACT AAAATTACCT GATCCAGAGG TAGCAGCACG TATTTTTCTT GGTACAGTAG TGCATTTTAT AATTCTTCAA TATATGCTCC ATAGTCAGGA TATCTTGCCA ATGGAGAGCG ATCGCCTGAT TGACAATCTG ATTAATTTAA TCACTATTAA TCTTTCTCAA AATACTTCTA CTAATCAGTA TTCTGGTACA AGGCAGAAAT CCCCAAGGCG CAGGCGTACA GCTTCGGGTA AATTCCAGAT GGACTACGCT TCAGAACCCA AACAGTTAAG GTCCATAAGA TTGACGAATA CAGCCTGGGA ACAATTGGCA GAATTAGCAG AGAAAAATAA TTTGACTCGC AGTGAAATGA TTGAAATCTT TGCCCGCCAA GGTTTTTCAG GCAATCACAC TAACTCGTAA
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Protein sequence | MSKKKAHIET NHADRLPSAE KVDAILNGAM QEFLTHGYAA TTMDRVTAAA GVSKTTVYSY FQDKEGLFAA LIEKLAQEKC FLMHNPELLQ GEPHIVLRRL ATNIFNQVEQ EPEFLSLVRL IIGESGRFPS LAKTFVCNID KQALQRLSEY FTEHSELKLP DPEVAARIFL GTVVHFIILQ YMLHSQDILP MESDRLIDNL INLITINLSQ NTSTNQYSGT RQKSPRRRRT ASGKFQMDYA SEPKQLRSIR LTNTAWEQLA ELAEKNNLTR SEMIEIFARQ GFSGNHTNS
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