| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1128 |
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| Symbol | |
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| ID | 3683519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1377432 |
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| End bp | 1380293 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637716464 |
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| Product | ABC transporter, transmembrane region |
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| Protein accession | YP_321647 |
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| Protein GI | 75907351 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0416332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0760637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAC AGGGGCAAAT TTACATAATT AATGGCAATG AACCAATTTT ACTCAATGAC
TCATCGGGGG TTTGGGTGGT TCAGTCTGGT TCTGTGGCGT TGTTTGCAGT CACAGTGAAA
GATGGTGTGA TTGATGGAAC TCGTCGTTAT TTATGTAGTA TTAGCCAAGG GGAGGCACTT
TTTGGCACGG TTCATCAGCA AAGCCAAATG CTCGCGGTTC CTATTGGAGA AGTTGAGTTA
CTGCTGTTAC ATCCAGAATG TTTTCGGGAG TTAGGCGCGA CAGCTAACGC TTGGATAGAA
AATTGGTTAA TGCAGCTTGG TAGTGTATTA TCTCAGATTC CCACTCCCAA AATTCAGGTA
AAAGCTGCGG GACAAGGGCG ATTTTCCCTA AATAATGGTC AGACTTTCCA ACCAGCAACA
GGTGTCAGCT GTTGGGTGGA ACTTCAGGAA GGGAATGTGT GTTTTCTGGG GTGTGAGGAA
TTGAGGTTAA CTACGGCTAC AACCTTCCCC CTGAATGACA AAATTTGGTT AACAGCAGTC
GGGGGAGTGC AACTGACAAC TCATAGCTCT AGCGAATACG AAAATCCCGA TATACTGCTG
GCTGGTTTAT CACAATTACA TACTCAAATC TTGTCTTGTG TCGCTTTATT GGATGAGCAA
GAAGCACAAG CAGAACTGAC AAGGTTACAA GAACGTCAAC GCCTAAATCG TCGAGTGACA
GCAGAGGCTT TAGGGGAACT ATCATCCACC CTCAATTCTC AAGACGGGAA CTTTTTCCTA
GAAGGTACTC CTTTATTGAT GGCTGCTGGT GCGGTAGGTA GGGCTATGGG GATAAAAATC
CGCCCTCCAT TGAGTTCGGA AAATCTCCAG CGAGTGAAGG AGCCGTTGGA AGCCATCGTT
CGGGCTTCAC GTATCCGTAT GCGGCGGGTG TTGTTGCGGG ATAATTGGTG GCTTAAAGAT
GCTGGTGCTT TAGTAGCTTA CACCAAAGAG AATCAACCAG TGGCGCTGTT ACCTGTTGCT
GGAAATCGTT ATGAAATGTT TGACCCAGTG AACCATAGCC GAGTGGGGGT AGATGAACGT
GTAGCCGCTA CACTTGCTCC TATGGCTTAT ATGTTTTATC GCTCTTTACC GGATAAGGTA
CTGCAAGCTA TAGATATAAT TCGGTTTACG CTGCAAGGAC ATGGACAGGA TTTACTACAA
ATTGTCTTAA CTGGTATTTT CATTACCCTT TTGGGGATGA TTACACCCTA TGCCACTTCA
ATAATTATAG ATAATGCCAT CCCTGATAGC GATCGCTCTT TATTATTACA AATTGGTTTA
GGTTTACTAG TTGCAGCTTT AGGTACGGGT ATATTTCAAC TGGCTCAAGG TTTTGCCTTG
CTGCGAATGG AAACCTCTGG CGATGCTTCT ACTCAGGCTG GTGTCTGGGA CAGGTTACTA
AATTTACCAG TTTCTTTCTT TCGCCAATAC ACCACAGGGG ACTTACTCTC ACGCATTTCC
TCTGTCAGTG CTATTCGTCG TCAACTTAGT GGTAAAACTT TAGTTGATTT TATTACCAGT
ATATTTGCGT TATTTTATTT AGGACAATTA TTTTATTACA ACTATAGATT AGCCCTGATT
GCCGTTGCTA GTGCCGTAGT AGCGATCGCC TTCACAACCA TTTCTGGTAT GCTCCTATTA
TCAAAAGTAC GCCCCTTGTT GGAAGTGCGG GGCAGTATTT TCGGGCAAAC AGTACAGCTA
ATCAACGGTA TTTCTAAACT GCGTATTGCT GGAGCTGAAG AACGCGCTTT TGCCGCTTGG
AGTAAAAACT ACGCTCGGCA GATTAAGCTG GAATTAAGCA CTCAACTGGT AGAAGATTTT
GTTGTGCTTT TCAATACAGT CATCCCCATA ATTACCTCTG GAGTCCTCTT CTGGTTCACC
ATCCAGCTAT TAGAAGAAGA TCAGACTTCC GGTGGTGTCG TTTTTTCTCT GGGTACTTTT
CTCGCTTTCA ACACAGCCTT TAGCAACTTT ACCAGAGGAA CCACAAACCT CAGCAATACT
GTTACACAAA TTTTACAGAT TATTCCCCAG TGGCAACGCA CACAGCCAAT TTTGGCAACC
GTACCAGAAG TGAACATCAC TAAAGCCGAC CCAGGTAAAT TGACTGGTAA AATTACTGTA
GACCATATGA CATTTCGGTA TCGTCATGAT GGACTACTCA CCCTAGATGA TATATCTATC
TCTGCGGAAC CGGGAGAATA TATTGCTTTA GTAGGCAGTT CTGGAAGCGG TAAATCAACC
ATATTGCGAT TACTGCTGGG GTTTGAAACG CCCCAAGCCG GAAGTATCTA CTACGATGGT
CAAGACCTCT CTGGCTTAGA TGTGGATGCA GTCAGACGGC AATTAGGTGT TGTATTACAA
AATGGTCAAC TAAGTTCAGC CTCTATTTTT GAAAATATTG CTGGTGGCGC TCAAATTACC
CTAGATGAAG CGTGGGAAGC AGCGCGGATG TCTGGTTTTG CTGATGATAT TAAAGCTATG
CCTATGCAAA TGCACACCGT AGTCAGCGAA GGTGGTGGTA ATATTTCTGG AGGACAAAGA
CAGCGATTAC TAATTGCTCG CGCCCTAGCC TTAAAACCCC GGATTTTGCT ATTTGATGAA
GCTACCAGCG CTCTTGACAA CAGAACCCAA GCAATAGTTA GTGAAAGTCT AGATAAATTA
CAAGTTACCA GAATTGCGAT CGCTCACCGA CTAAGTACAA TTCGCAATGC TCACCGCATC
TATGTATTAC AAGCAGGTCG GTTAGTACAA CAAGGCACTT TTTCAGAGTT AGCAAATGCT
GAGGGAATTT TTGCTCAATT GATGGCTCGA CAAATGACCT AA
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| Protein sequence | MKLQGQIYII NGNEPILLND SSGVWVVQSG SVALFAVTVK DGVIDGTRRY LCSISQGEAL
FGTVHQQSQM LAVPIGEVEL LLLHPECFRE LGATANAWIE NWLMQLGSVL SQIPTPKIQV
KAAGQGRFSL NNGQTFQPAT GVSCWVELQE GNVCFLGCEE LRLTTATTFP LNDKIWLTAV
GGVQLTTHSS SEYENPDILL AGLSQLHTQI LSCVALLDEQ EAQAELTRLQ ERQRLNRRVT
AEALGELSST LNSQDGNFFL EGTPLLMAAG AVGRAMGIKI RPPLSSENLQ RVKEPLEAIV
RASRIRMRRV LLRDNWWLKD AGALVAYTKE NQPVALLPVA GNRYEMFDPV NHSRVGVDER
VAATLAPMAY MFYRSLPDKV LQAIDIIRFT LQGHGQDLLQ IVLTGIFITL LGMITPYATS
IIIDNAIPDS DRSLLLQIGL GLLVAALGTG IFQLAQGFAL LRMETSGDAS TQAGVWDRLL
NLPVSFFRQY TTGDLLSRIS SVSAIRRQLS GKTLVDFITS IFALFYLGQL FYYNYRLALI
AVASAVVAIA FTTISGMLLL SKVRPLLEVR GSIFGQTVQL INGISKLRIA GAEERAFAAW
SKNYARQIKL ELSTQLVEDF VVLFNTVIPI ITSGVLFWFT IQLLEEDQTS GGVVFSLGTF
LAFNTAFSNF TRGTTNLSNT VTQILQIIPQ WQRTQPILAT VPEVNITKAD PGKLTGKITV
DHMTFRYRHD GLLTLDDISI SAEPGEYIAL VGSSGSGKST ILRLLLGFET PQAGSIYYDG
QDLSGLDVDA VRRQLGVVLQ NGQLSSASIF ENIAGGAQIT LDEAWEAARM SGFADDIKAM
PMQMHTVVSE GGGNISGGQR QRLLIARALA LKPRILLFDE ATSALDNRTQ AIVSESLDKL
QVTRIAIAHR LSTIRNAHRI YVLQAGRLVQ QGTFSELANA EGIFAQLMAR QMT
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