Gene Ava_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1100 
Symbol 
ID3678515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1340857 
End bp1341951 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content47% 
IMG OID637716436 
Producthypothetical protein 
Protein accessionYP_321619 
Protein GI75907323 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTC ATCAGGATCT CAAGCAGTTG CAGTCTTTGA CTAAGGTTCC AGCACTTTCT 
ATCCTATTGC CGACTCATCG CACATCACCC GATAACAAAC AAGATCCCAT TCTGGTGAAA
AATCTGGTAA GTGAGGCAAC AAAGCGGCTT GACAAAGAAT TTACTAGCCG CCAGTTAGAA
CCATTGTTAA AGCAGCTCGA AACTCTGGTG AGCGAGATTG ACTACCCCCA CACCCTAGAT
GGGTTGGCAC TATATGTCAG CCATGACTTT GCCAAGCTTT ATTACCTGCC TTTTCCTGTA
CCTGCAAGGG TTGTGATTGA TCAAACCTTT GCAACACGAG ATTTGGTCTA TGGAAGGCAT
CGGGAGCATC GTTATTGGGT TTTGCTGTTG AGTCAGGCAT CCACCCGCTT GTTAGCTGGG
ACAGGAGAAA CCCTTGAGGA GGTTAACGAT GAAAACTTCC CCATGCAAAT GACAGGCCCT
GGAGCCACCA CCCCGCTTCC CTATGAGACT GATTCTAGCT ATCGAGACGA TAGGTATCGC
AGATTTTTTC AGCAGGTAAA CAGTGCATTG ACGCTCTATG AGAATGACTC ACTACCGTTG
ATTGTGGGAG GGGTTGAGCG GCAAATATCT TTCTTCCAAG AAGTTTCTCA AAATACTCAA
GCGATGTCTC CGAGGGGCTA CGCTTACGCT GGAACTTTGA GAGGCAATTT TGATAGAGCG
ACTATTCACG AATTGACTCC TCAGGTGTGG TCAATTATGC AGTCCGTTCA GGAGGCGCAA
CAAGCTGAGG CACTTCAGGC ATTAGACGAC GCGATGGGTA CTCAAAGCGT CGTTTCTACA
ATTGGGGAAG TGTGGCGATT AGCACACGAA GGTCGGGGGA AATTGCTTTT AGTTGAAAAA
AACTACCATG TACCAGCGAT ATTAACTGAA GACGGCAGGT TTGAGTTAGT GGATCAACCA
GGCGGGACAG ATGTGATGGA TGATGCTGTC GATGAAATTA TCGAAGTTGT CTTGGCTAAG
GGGGGAAAGG TTGCCATTGT GGATGATGAA GTACTATCCA TTTATCAGCG AATTGCATTG
ATTTTTCGGT ATTGA
 
Protein sequence
MITHQDLKQL QSLTKVPALS ILLPTHRTSP DNKQDPILVK NLVSEATKRL DKEFTSRQLE 
PLLKQLETLV SEIDYPHTLD GLALYVSHDF AKLYYLPFPV PARVVIDQTF ATRDLVYGRH
REHRYWVLLL SQASTRLLAG TGETLEEVND ENFPMQMTGP GATTPLPYET DSSYRDDRYR
RFFQQVNSAL TLYENDSLPL IVGGVERQIS FFQEVSQNTQ AMSPRGYAYA GTLRGNFDRA
TIHELTPQVW SIMQSVQEAQ QAEALQALDD AMGTQSVVST IGEVWRLAHE GRGKLLLVEK
NYHVPAILTE DGRFELVDQP GGTDVMDDAV DEIIEVVLAK GGKVAIVDDE VLSIYQRIAL
IFRY